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SCNpilot_expt_1000_bf_scaffold_1614_curated_1

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: comp(2..397)

Top 3 Functional Annotations

Value Algorithm Source
Transketolase {ECO:0000256|RuleBase:RU004996}; EC=2.2.1.1 {ECO:0000256|RuleBase:RU004996};; TaxID=1050720 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens F2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.2
  • Coverage: 132.0
  • Bit_score: 248
  • Evalue 3.80e-63
Transketolase (EC:2.2.1.1); K00615 transketolase [EC:2.2.1.1] similarity KEGG
DB: KEGG
  • Identity: 89.4
  • Coverage: 132.0
  • Bit_score: 247
  • Evalue 1.90e-63
transketolase n=1 Tax=Rhizobium giardinii RepID=UPI00037BB9BD similarity UNIREF
DB: UNIREF100
  • Identity: 91.7
  • Coverage: 132.0
  • Bit_score: 255
  • Evalue 3.80e-65

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Taxonomy

Agrobacterium tumefaciens → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 396
ATGGACGCCTACAAGAAGAAGCTCGCCGACGCCCCGCCGACCGTCGCCACCCGCAAGGCTTCTGAAGACGCGCTCGAAGTCATCAACGGCATCGTGCCGGAGATGATCGGCGGCTCCGCCGACCTGACGCCGTCCAACAACACCAAGACCAGTCAGATGAAGTCGATCACGCCGACCGATTTCTCCGGCCGTTACATGCATTGGGGCATCCGCGAGCACGGCATGGCCGCCGCCATCAACGGCATCGCCCTGCATGGCGGGTTGATCCCCTATGCCGGCGGCTTCATGATCTTCTCGGACTATTGCCGTCCGTCGATCCGCCTCGCCGCGCTGATGGGCATCCGCGTCATCCACGTCCTGACGCACGATTCGATCGGCGTCGGCGAAGACGGCCCG
PROTEIN sequence
Length: 132
MDAYKKKLADAPPTVATRKASEDALEVINGIVPEMIGGSADLTPSNNTKTSQMKSITPTDFSGRYMHWGIREHGMAAAINGIALHGGLIPYAGGFMIFSDYCRPSIRLAALMGIRVIHVLTHDSIGVGEDGP