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SCNpilot_expt_1000_bf_scaffold_1344_curated_11

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: comp(10115..11155)

Top 3 Functional Annotations

Value Algorithm Source
D-xylose-binding periplasmic protein n=1 Tax=Rhizobium sp. RepID=L0NHD7_RHISP similarity UNIREF
DB: UNIREF100
  • Identity: 91.3
  • Coverage: 346.0
  • Bit_score: 618
  • Evalue 4.50e-174
D-xylose-binding periplasmic protein {ECO:0000313|EMBL:CCF20226.1}; TaxID=391 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.3
  • Coverage: 346.0
  • Bit_score: 618
  • Evalue 6.30e-174
xylF; D-xylose-binding periplasmic protein XylF similarity KEGG
DB: KEGG
  • Identity: 89.3
  • Coverage: 346.0
  • Bit_score: 609
  • Evalue 6.50e-172

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Taxonomy

Rhizobium sp. → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1041
ATGAATTCGTTTCTGAAGCTGATGGCCGGCGCGGCCATCGTCGTCACCATGCATTCGGCTGCCATTGCGGCTGATCTGGTCGTCGGTGTTTCCTGGTCGAACTTCCAGGAAGAGCGTTGGAAGACCGACGAAGCCGCCATCAAGAAGGCGCTTGAAGCTGCTGGCGCAAAGTACATCTCGGCCGACGCCCAGTCTTCCGCCGCCAAGCAGCTGACTGACGTCGAGTCGCTGATCTCTCAGGGCGCAAACGCCCTCATCGTCCTGGCGCAGGACAGCGACGCCATCGGCCCGGCCATCGAAAAGGCCGCTGCGGAAGGCATCCCGGTCGTCGGTTACGACCGCCTGATCGAAAATCCGGCGGCCTTCTACATCACCTTCGACAACAAGGAAGTCGGCCGCATGCAGGCGCGCGAAGTCTTCAAGGCCAAGCCTGAAGGCAACTTCGTCTTCATCAAGGGCTCGTCGTCCGACCCGAATGCGGACTTCCTGTTTTCGGGCCAGGTCGAGGTGCTGAAGGAAGCCATGGACGCCGGCAAGATCAAGAATGTCGGCGAAGCCTACACCGACGGCTGGAAGCCGGAAAATGCCCAGAAGAACATGGAGCAGTTCCTGACCGCCAACGACAACAAGGTCGATGCGGTCGTGGCTTCCAACGACGGCACGGCCGGCGGCGCGATCGCTGCCCTCGATGCCCAGGGTCTTGCCGGTTCCGTTCCGGTTTCCGGCCAGGATGCCGACAAGGCGGCGTTGAACCGCGTCGCGCTCGGCACCCAGACCGTTTCCGTCTGGAAGGACTCGCGTGAACTCGGCAAGAATGCCGCTGAGATCGCCCTGGCGCTGGCCGGCGGCAAGAAGATGGACGAAATCCCGAACGTCACCACCTTCACCGGCGGCCCGAAGGGCGCTGAAATGAAGTCGGTCTTCCTCGCTCCGCTGCCGATCACCAAGGACAACCTCAACGTTGTCATCGATGCCGGCTGGATCAGCAAGGACGAAGCTTGCCAGGGCGTCAAGGCCGGCTCCGTGGCTGCCTGCAACTAA
PROTEIN sequence
Length: 347
MNSFLKLMAGAAIVVTMHSAAIAADLVVGVSWSNFQEERWKTDEAAIKKALEAAGAKYISADAQSSAAKQLTDVESLISQGANALIVLAQDSDAIGPAIEKAAAEGIPVVGYDRLIENPAAFYITFDNKEVGRMQAREVFKAKPEGNFVFIKGSSSDPNADFLFSGQVEVLKEAMDAGKIKNVGEAYTDGWKPENAQKNMEQFLTANDNKVDAVVASNDGTAGGAIAALDAQGLAGSVPVSGQDADKAALNRVALGTQTVSVWKDSRELGKNAAEIALALAGGKKMDEIPNVTTFTGGPKGAEMKSVFLAPLPITKDNLNVVIDAGWISKDEACQGVKAGSVAACN*