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SCNpilot_expt_1000_bf_scaffold_6571_curated_8

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: comp(4581..5330)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator ROK family n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=B9K0Q3_AGRVS similarity UNIREF
DB: UNIREF100
  • Identity: 73.5
  • Coverage: 249.0
  • Bit_score: 371
  • Evalue 8.90e-100
xylR; transcriptional regulator ROK family similarity KEGG
DB: KEGG
  • Identity: 73.5
  • Coverage: 249.0
  • Bit_score: 371
  • Evalue 2.80e-100
Transcriptional regulator ROK family {ECO:0000313|EMBL:ACM38451.1}; TaxID=311402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium vitis (strain S4 / ATCC BAA-846) (Rhizobium vitis; (strain S4)).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.5
  • Coverage: 249.0
  • Bit_score: 371
  • Evalue 1.30e-99

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Taxonomy

Agrobacterium vitis → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 750
ATGCGGGCAACGCGGGCAGAAAGCCGGGTGCTCGGCGCCGGCATGGCTCTGCCGGGACCGTTCGGCGTCGAATCCATGAGTTTCGTCGGCCCGACGACGATGAGCGGCTGGAAGAACGTCGATATTCGCTCGCGACTGGCGGAAGCCGCCGGCCTGCCGGCCTTCATCGAGACCGATACGGCCTCCGCCGCCCTCGGCGAGCAGCTTTACGGCCTCGGTCTGCAGCTTTCCGACTATTATTACCTCTATTTCGGCGTCGGCCTCGGCGGTGCCATGGTGCATGAGGGCGCGGTGATGCGCGGCGCCTGGGGCAATGCCAGCGAAATCGGCCATATCCCGGCCGTGCTCGACGGCGAGCCGTGCCCCTGCGGCAATCGCGGCTGCCTGGAACGCTATCTCTCGCTCGATGCCTTCAACCGGCGCGGGGTTTCGGAAGCGCAATGGGTGGCGGAGATCGCGCCGATCTTCCGCAATGCCGTCCGCACCATCGAAAACCTTTTCGATCCGCAGACCATCGTGCTCGGCGGCCTGGCGCCGCTGGCGCTGATCGAGCAGCTGGCCGCCGCCAACGCCGACCTGCCGAATTCCGTTGCCGCCCGCAGCAACCGCACGCAGCCGCGCATCGTCGTCGCCAGCGATTGCGAGCAATCGGTGCTCAGGGGCGCCGCAGCGCTTGCCGTGTCCGGCGTGCTGTCGCCCCGCTTCGGACAGATGTTTTCGACCGCCGACGAGAAAGGCATTGCCGCATGA
PROTEIN sequence
Length: 250
MRATRAESRVLGAGMALPGPFGVESMSFVGPTTMSGWKNVDIRSRLAEAAGLPAFIETDTASAALGEQLYGLGLQLSDYYYLYFGVGLGGAMVHEGAVMRGAWGNASEIGHIPAVLDGEPCPCGNRGCLERYLSLDAFNRRGVSEAQWVAEIAPIFRNAVRTIENLFDPQTIVLGGLAPLALIEQLAAANADLPNSVAARSNRTQPRIVVASDCEQSVLRGAAALAVSGVLSPRFGQMFSTADEKGIAA*