ggKbase home page

SCNpilot_expt_1000_bf_scaffold_6785_curated_10

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: comp(8421..9371)

Top 3 Functional Annotations

Value Algorithm Source
DeoR faimly transcriptional regulator n=1 Tax=Rhizobium meliloti RepID=UPI000379FE2F similarity UNIREF
DB: UNIREF100
  • Identity: 95.3
  • Coverage: 316.0
  • Bit_score: 582
  • Evalue 3.20e-163
DeoR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 94.6
  • Coverage: 316.0
  • Bit_score: 577
  • Evalue 1.90e-162
Transcriptional regulator, DeoR family {ECO:0000313|EMBL:ABR61957.1}; TaxID=366394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium medicae (strain WSM419) (Ensifer medicae).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.6
  • Coverage: 316.0
  • Bit_score: 577
  • Evalue 8.60e-162

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sinorhizobium medicae → Sinorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 951
ATGGGACGGGTCAACGAAATGCGACTGATCGCCCGCATCGCTCAGATGTACCACGTCGAGCGCAAGCGGCAGGCGGAGATCGCCGAGATCATGCATATGTCGCAGGCAACCGTCTCGCGCATGCTGAAACGGGCAGAGCAGGAAGACATCGTCCGCACCACGGTCATCCCCCCGCCGGGCACCTTCGCCGAACTCGAGACGGCGTTGCGTGAGCGCTACAAGCTGACCGAAGCTATCGTCATCGACTGTTCCGAGGATCGCGACGGCGCGATCATGGCGCGCATCGGCGAGGCTGCGGCCCATTTTCTGGAAGTCACGCTGCAGCAGGACGAGATTATCGGCGTTTCCAGCTGGAGCCAGACGATCCTGCGCATGGTGGACAACATCCATCCGCTGAAGAACGCCAAGGCCAAATATATCGTCCAGATTCTCGGCGGCATGGGCGATGCCTCGGTCCAGACCCATGCGACGCAGCTGACCGCCCGCCTGGCGAAACTCACCGGCGGCGAGCCACGGCTGCTGCTCGTGCAGGGCATCACCTCGTCGCGGGAAGCCAAGCTCGTGATGCTTGCCGACCCGGTCGTGCGCGAAACCATGGATCTTTTCGGCCGTCTCAGCCTGGCGATCGTCGGCATCGGCGCCGTCGAGCCGTCCGAACTGCTGGCGCGCTCCGGCAACGTCTTTTCCCGCCAGGAAATGGCGATGCTGCATGAGGCCGGCGCCGTCGGCGAGATTTCCTACCGCTTTTACGACAAGGACGGCAAGCCTGTCGAAACCCCGCTCAACGACCGGGTCATAGGCCTGTCGCTGGAACAGCTTCGCAAGACCGACCGCGTCATGGCCTTGGCCGGCGGCGAATCCAAAACCCAGGCCATCGCCGGCGCCCTGAAACTGGGCGTCATCGATGTGCTTGTCACCGACAAATTCACTGCAGCCCGGTTGACCGCCTGA
PROTEIN sequence
Length: 317
MGRVNEMRLIARIAQMYHVERKRQAEIAEIMHMSQATVSRMLKRAEQEDIVRTTVIPPPGTFAELETALRERYKLTEAIVIDCSEDRDGAIMARIGEAAAHFLEVTLQQDEIIGVSSWSQTILRMVDNIHPLKNAKAKYIVQILGGMGDASVQTHATQLTARLAKLTGGEPRLLLVQGITSSREAKLVMLADPVVRETMDLFGRLSLAIVGIGAVEPSELLARSGNVFSRQEMAMLHEAGAVGEISYRFYDKDGKPVETPLNDRVIGLSLEQLRKTDRVMALAGGESKTQAIAGALKLGVIDVLVTDKFTAARLTA*