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SCNpilot_expt_1000_bf_scaffold_6785_curated

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_6785_curated_1
Rhodobacter sp. CACIA14H1, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..121
DNA (120bp) protein (40aa)
Sugar ABC transporter permease n=1 Tax=Rhodobacter sp. CACIA14H1 RepID=V7EQJ1_9RHOB
Sugar ABC transporter permease {ECO:0000313|EMBL:ESW62250.1}; TaxID=1408890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sp. CACIA14H1.;"
SCNpilot_expt_1000_bf_scaffold_6785_curated_2
Rhodobacter sp. CACIA14H1, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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182..1276
DNA (1095bp) protein (365aa)
glycerol-3-phosphate-transporting ATPase (EC:3.6.3.20); K10112 maltose/maltodextrin transport system ATP-binding protein
Sugar ABC transporter ATP-binding protein n=1 Tax=Rhodobacter sp. CACIA14H1 RepID=V7EPS5_9RHOB
Sugar ABC transporter ATP-binding protein {ECO:0000313|EMBL:ESW62249.1}; TaxID=1408890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sp. CACIA14H1.;"
SCNpilot_expt_1000_bf_scaffold_6785_curated_3
Rhodobacter sp. CACIA14H1, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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1304..1915
DNA (612bp) protein (204aa)
Uncharacterized protein n=1 Tax=Rhodobacter sp. CACIA14H1 RepID=V7EQL4_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:ESW62275.1}; TaxID=1408890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sp. CACIA14H1.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_6785_curated_4
Rhodobacter sp. CACIA14H1, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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1944..3512
DNA (1569bp) protein (523aa)
carbohydrate kinase FGGY; K00854 xylulokinase [EC:2.7.1.17]
Xylulokinase n=1 Tax=Rhodobacter sp. CACIA14H1 RepID=V7EMK0_9RHOB
Xylulokinase {ECO:0000313|EMBL:ESW62248.1}; TaxID=1408890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sp. CACIA14H1.;"
SCNpilot_expt_1000_bf_scaffold_6785_curated_5
Rhodobacter sp. CACIA14H1, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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3599..4150
DNA (552bp) protein (184aa)
Glyoxalase n=1 Tax=Rhodobacter sp. CACIA14H1 RepID=V7EPY9_9RHOB
Glyoxalase {ECO:0000313|EMBL:ESW62247.1}; TaxID=1408890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sp. CACIA14H1.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_6785_curated_6
unknown

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comp(4464..4736)
DNA (273bp) protein (91aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_6785_curated_7
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5156..6223
DNA (1068bp) protein (356aa)
Probabable FAD-dependent oxidoreductase n=1 Tax=Nitratireductor indicus C115 RepID=K2N1S5_9RHIZ
Probabable FAD-dependent oxidoreductase {ECO:0000313|EMBL:EKF41433.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
probabable FAD-dependent oxidoreductase
SCNpilot_expt_1000_bf_scaffold_6785_curated_8
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6350..7291
DNA (942bp) protein (314aa)
Putative transporter n=1 Tax=Rhizobium freirei PRF 81 RepID=N6UV00_9RHIZ
Putative transporter {ECO:0000313|EMBL:ENN85500.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
putative major facilitator superfamily (MFS) drug efflux transporter
SCNpilot_expt_1000_bf_scaffold_6785_curated_9
Sinorhizobium americanum, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7601..7810)
DNA (210bp) protein (70aa)
budC; diacetyl reductase (EC:1.1.1.304)
Diacetyl reductase n=1 Tax=Sinorhizobium fredii USDA 257 RepID=I3X3J9_RHIFR
Short chain dehydrogenase {ECO:0000313|EMBL:KEC79816.1}; TaxID=1408224 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium americanum CCGM7.;"
SCNpilot_expt_1000_bf_scaffold_6785_curated_10
Sinorhizobium medicae, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8421..9371)
DNA (951bp) protein (317aa)
DeoR faimly transcriptional regulator n=1 Tax=Rhizobium meliloti RepID=UPI000379FE2F
DeoR family transcriptional regulator
Transcriptional regulator, DeoR family {ECO:0000313|EMBL:ABR61957.1}; TaxID=366394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium medicae (strain WSM419) (Ensifer medicae).;"
SCNpilot_expt_1000_bf_scaffold_6785_curated_11
Sinorhizobium medicae, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9394..9867)
DNA (474bp) protein (158aa)
carbohydrate kinase FGGY; K00864 glycerol kinase [EC:2.7.1.30]
Carbohydrate kinase FGGY n=1 Tax=Sinorhizobium medicae (strain WSM419) RepID=A6UE76_SINMW
Carbohydrate kinase FGGY {ECO:0000313|EMBL:ABR61956.1}; TaxID=366394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium medicae (strain WSM419) (Ensifer medicae).;"
Displaying 11 items

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