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SCNpilot_expt_1000_bf_scaffold_1822_curated_1

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: 804..2132

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Aureimonas ureilytica RepID=UPI00036C9A3D similarity UNIREF
DB: UNIREF100
  • Identity: 65.3
  • Coverage: 444.0
  • Bit_score: 587
  • Evalue 1.10e-164
Type VI secretion protein, VC_A0114 family {ECO:0000313|EMBL:EYR83991.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.4
  • Coverage: 443.0
  • Bit_score: 705
  • Evalue 6.50e-200
hypothetical protein; K11893 type VI secretion system protein ImpJ similarity KEGG
DB: KEGG
  • Identity: 55.3
  • Coverage: 443.0
  • Bit_score: 472
  • Evalue 1.60e-130

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1329
ATGTCATTTGACAAGGTGATATGGTCGGAGGGCATGTTCATCCGTGCCCAGCACTTCCAGCAGGATGCCCGTTACGTCGAGCGCCTGGTGCGCAACCGCACGCGCGGCCTGCGACCCTACGCCTGGGGCCTGACCGAACTGCGCCTCAACCGCGAACTCCTGTCGATCGGCCGGTTCGGCGTCGAGCGCGCCTCCGGCGTCTTCGCCGACGGCACGCCGTTTTCCATTCCCGACGACGCGGCGGAACTGCCGCCGCTGCAGCTCAACGAAAACATCCGCAACACCATCGTCTATCTGACGCTGCCGATCAGCCAGCCGGGCGGGCGCGAGACGGCCGAACTGTCGGCGGAAACGCTGACCCGCTACGCCTCGACCGAGATCGAGATTTCCGACGCCAACAGCAGCGACATTTCCGCCGCGCCGATCGTCGTCGGGAAGCTGCGCCTGCGTTACGCGTTGGAAAGCAGCGACCGCAGCGGTCTCGTCAGCATCGGCCTTGCCCGCATCATCGAGGTCCGGGCCGACAATTCGGTGGTGCTCGACGAAAGCTACGTGCCGCCGGTGCTCGATTCCCAGGTTTCCAGCCTGTTGTCCGGCTTCATGACCGAGATCGTCGGCCTGCTCAACCACCGTGGCGAGGCGATTGCCTCGCGCCTGGCCGGTTCCAGCTCCGGCACGGCGTCCGAAATCACCGACATGATGATGCTGCAGACGATCAATCGCTGGCAGCCGGTCTTTTCGCATCTGGCGTCGGCCTCCTTCGTCCATCCCGAACAGCTTTTCATGTCGGCAATCGGGCTTGCAGGCGAGCTGTCGACCTTCACCAGCGGCTCGCATCGCCCCCGGCCCTTCCCGGTCTATGACCATGAGCGGCTGCAGCTGGTGTTCACGCCCGTCGCCGCCGCCATCCGCCAGGCGCTGAGCGCGGTGCTCGAACGCAATGCCATCGCCATTCCGCTGACGGAACACCGGTACGGCATCCGCGTGGCCGAGGTTCCGGACCGCTCGCTTTACCTGAAATACACCTTCGTGCTCGCCGGAAAGGCCGACATGCCGGCCGAAGCACTGGTGCGCCGCCTGATCGGCCAGGTGAAGATCGGTGCCGTCGAGCAGATCACCGAGCTGGTCAACACCGCGCTGCCCGGCATCATGCTGCGCGCCCTGCCTGTCGCGCCGCGCCAGATCCCGTATCACACCGGCAAGGCCTATTTCGAACTCGACCGTTCCAGCGCCATCTGGAAACAGGTGGCCGGCGGTGCCGGCCTTGCCATTCACGTCGCAGGGGAATTTCCCGGACTCGAGCTCGATTTGTGGGCCGTCAAAGATTGA
PROTEIN sequence
Length: 443
MSFDKVIWSEGMFIRAQHFQQDARYVERLVRNRTRGLRPYAWGLTELRLNRELLSIGRFGVERASGVFADGTPFSIPDDAAELPPLQLNENIRNTIVYLTLPISQPGGRETAELSAETLTRYASTEIEISDANSSDISAAPIVVGKLRLRYALESSDRSGLVSIGLARIIEVRADNSVVLDESYVPPVLDSQVSSLLSGFMTEIVGLLNHRGEAIASRLAGSSSGTASEITDMMMLQTINRWQPVFSHLASASFVHPEQLFMSAIGLAGELSTFTSGSHRPRPFPVYDHERLQLVFTPVAAAIRQALSAVLERNAIAIPLTEHRYGIRVAEVPDRSLYLKYTFVLAGKADMPAEALVRRLIGQVKIGAVEQITELVNTALPGIMLRALPVAPRQIPYHTGKAYFELDRSSAIWKQVAGGAGLAIHVAGEFPGLELDLWAVKD*