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SCNpilot_expt_1000_bf_scaffold_1822_curated_2

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: 2244..3614

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EEL4_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 74.0
  • Coverage: 458.0
  • Bit_score: 660
  • Evalue 1.30e-186
Type IV / VI secretion system protein, DotU family {ECO:0000313|EMBL:EYR83992.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.0
  • Coverage: 458.0
  • Bit_score: 660
  • Evalue 1.90e-186
hypothetical protein; K11892 type VI secretion system protein ImpK similarity KEGG
DB: KEGG
  • Identity: 37.1
  • Coverage: 455.0
  • Bit_score: 278
  • Evalue 3.50e-72

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1371
ATGGCTGGCAAGGGCTTCGAGCCGCTTGCCCGTCCCGGCACGACCGCGACCTTTTCCGACGACTTCTTTGATCCCAAGCCGAAGACACGACAAGGCTTTACCGACGATTTCGGCCTGAACCAACCGGTGATGGAAAAGCCGTCCCGGCGCAGCGATGCCGCCATCGACAAGGCTTTCGAGCTCGCCGCGATCAATCCGCTGGTCAGTGCCGCCTCGCCGCTGCTGTGGCTGGCCGGCCGCCTGAACGAAAGCGCTCCGCCGGAAGACATCCCGGAATTCCGCGGCCGAGTCATGGACGAGATCCGCCATTTCGAGACCGCCGCCATGGCGAAGGACGTGCCGGACAGGCTGATCCGCGTGTCCCGCTATGCGCTCTGCGCCGTGATCGACGATATCATCCTCTCCACCCGCTGGGGCGCCTCCAGCGGCTGGGCGAGCAGCAGCCTCGTCAGCATTCTCTACAACGAGACCTGGGGCGGCGAACGCTTCTACGACCTCTTGTCGCAGGTGATGCAGCAGCCGGAGCAGAATATCGATGCCCTGGAACTGATGGCGATCTGCCTGTCGATCGGCTTTTCCGGCAAATATCGGGTGGCCGAAGGCGGCCAGGGCCAGCTGCAGCGGCTGCGCCAGGATCTCTACCGCACGATCCGCCGCATCCGCGGCCCCTATGAGCGCAATCTTTCCGCCGCCTGGCAGACCATGCCGGTGCCACACCGCGCCCCGATCAGCATGGCGGCGCCGTGGGCGGCGGCCCTGCTGCTGCTGCTTCTGCTCGCCGGCCTCTGGGCCTTTTCCAGCATCAGCCTGAGGGCGAGCGTCGAGCGTTCCGCCGAACAGATCCGCGCGCTGGTGCCGACCATTCCGGTCATGGTCGAGCGCGCCGGCATTCCCGATATCCCCGAACCGGTGCCGCCGGTGCGCATGACGCAGATCGAGCGGATCACCGAAGCGCTGGCCGCCGAAATCGCCGCACGCCGCATCGAGGTCGCCACGGTCGACGACAAGGTCGTCATCCGCATGCTCGGCGCCTCCTTCCCGTCAGGCGGACTGGATCTGGCACTCACCGAAGAGCCGCTGATCGCCAGGATCGGCGCCGCGCTCGACCCGGAACCCGGTCCCATCCTCGTCGTCGGCCATACCGACAACGTGCCCGTCGGCGCCGGCAGCCCGCTTGGCGACAACATGGCGATTTCGGTCGCCCGGGCCCGCTCGGCGGCGCAGATGCTGCAGAAGCATGTCGAGGACCAGTCGCGCGTCAGCTTCGAAGGCCGCGGCGAGACCGATCCGATCGTGCCGAACAGCTCGGCAGAAGACCGTGCCCGCAACCGGCGCGTCGAATTCCAGATCCCGGCGGAAAAGACGCCATGA
PROTEIN sequence
Length: 457
MAGKGFEPLARPGTTATFSDDFFDPKPKTRQGFTDDFGLNQPVMEKPSRRSDAAIDKAFELAAINPLVSAASPLLWLAGRLNESAPPEDIPEFRGRVMDEIRHFETAAMAKDVPDRLIRVSRYALCAVIDDIILSTRWGASSGWASSSLVSILYNETWGGERFYDLLSQVMQQPEQNIDALELMAICLSIGFSGKYRVAEGGQGQLQRLRQDLYRTIRRIRGPYERNLSAAWQTMPVPHRAPISMAAPWAAALLLLLLLAGLWAFSSISLRASVERSAEQIRALVPTIPVMVERAGIPDIPEPVPPVRMTQIERITEALAAEIAARRIEVATVDDKVVIRMLGASFPSGGLDLALTEEPLIARIGAALDPEPGPILVVGHTDNVPVGAGSPLGDNMAISVARARSAAQMLQKHVEDQSRVSFEGRGETDPIVPNSSAEDRARNRRVEFQIPAEKTP*