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SCNpilot_expt_1000_bf_scaffold_1822_curated_3

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: 3611..5428

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Aureimonas ureilytica RepID=UPI000371E5AA similarity UNIREF
DB: UNIREF100
  • Identity: 37.1
  • Coverage: 617.0
  • Bit_score: 351
  • Evalue 2.30e-93
Uncharacterized protein {ECO:0000313|EMBL:EYR83993.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 49.5
  • Coverage: 612.0
  • Bit_score: 559
  • Evalue 7.90e-156
type VI secretion protein IcmF; K11891 type VI secretion system protein ImpL similarity KEGG
DB: KEGG
  • Identity: 28.2
  • Coverage: 650.0
  • Bit_score: 186
  • Evalue 1.80e-44

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1818
ATGAGGCCGGCCGCGCTGATTTCCTGGTTCATCGGGCTTCTGGTCGCTGCCGGCGCGAGCTGGCTGATCTGGACCCGTGCGGCGGATTTCCTTCCCCTGGATCTCCGCCAGGACCTGCGTTTCGGCGTGGCGCTGCTTCCCCTGATCGTCTGGGCCATGGTGCCTGTCTTGTTTTCCCGGCTTTTCTTCAAGGCGGCGGGACCGCAGGAATCGCCTACGTTGCGCAGCCACCGCCGGGCCGCCATCGCCTTCCTCGCCAATCGCGGCGTCAAAGGCCGGCGCGGCCGTTACGCCAAACCGTTCTTCCTGCTCGTCGGCCCCCCCGGCAGCGGCAAATCGAGCATTCTCGAACGCTCCGACATGCGGCTCGGCATGCCGATGACGATCGGCAATTCCACATGGTGGGTGGGGCCGGACGCGGTCTTCGTCGAAACGACGTTCGGCATGGAAGAAGCCACGACCCGCGAGGTCTACGATCTCCTGCGCAGCCTGCGGCCGAAACTGCCTGTTAACGCCACGCTGCTGACGCTGAGCCCCGCCGACCTGACGCTGGCCGATCTTGCCGAGCAGCGCTCCGTGATGCATGCCGTCACGAACAGCCTGCGCCTGCTGGACGAGGTCACCAAGACCAGCATCCCCGCCTATCTCCTGCTCTCCAAAACCGACCTCGTTCCAGGCTTCCGCGAATTCTTCGACCGCTACGAACCGCAGGAGCGTGAACAGCCCTGGGGCTTCATTCTGCCCTATGAGACCATGGCCAAGGGCAAGACGGCGGTGGAGCGGCACGCCGAAATCGACAAGGGTTTTCAGGATCTGCTCGCCGCCATGCGGGCGCGCCACATGGAATGGCTGTCGCGTGAGGCCGATCCGGTGCGCTGCGGCCACCTTCAGGGTTTTTCGGCGCAGATCGCCGCGCTGCAGAAAACCATCACGCCGCTGCTCGAAAACCTGGCGCCGGAACACGACCGCAACTGGAAGGGCGCGCTGATGCGCGGCATCTTCCTGACCAGCGCCCGGCAGGAGCCGCTGTCGATCGACGCGCTGCTGCCGGAGCTGTCTCGGCGTTTCGCCATGCCGCGCATCGGCATGCTGCCACCCGATCTCGGCCTCGACGAAGAGGACCAGGGATATTTCATCACCGGCGTCCTGAAACGCATCGTCATTCCGGAGGCCGGACTGGTGTTGCGCGGAAAACGCCGCGGCGCCGGTTTCTTCTTGCAATGGGCGCTGATCGCGGCGACCGTGCTCGCCTGCCTCGGCAGCGGCTACTGGATCTTCCGCACCTTCGACGAAGAGATCAAGTTCGCCGGCAATCTCTCCGACCGTCTGGCCGTCCTGAAGCCGGTCGCCAATCCGGCCAAGCGCGAGGACCTGCCGGCGCTGCTGCAGAGTTTCCGGCAGTTGCGGCAGATCGAGGCGGCACTCGGCACACCGCGGCTGGCCGTCGCCTATCCGGTTCCGGGCCTTTCCGTCGGGCCGCAGCTCGACAAGCGCTTCGTGCTGGCCGAGCGCGGCTTGCGGGTCAATGCGCTGGTCTTCCACCTCGCCGCCCGTCTCGAGGCCGACCTGATCGACGTCAACGCCGATGTGGAGACGCTGCGCAAGCGTCTGGCCGTCGCCACCGATGCGCGCAACGTCGATTCGCCGATCCTGCTCGACTGGGTGGCACAGAATGCGGCAAGCCTCGCCGCCGATGACAAGGCGACGCTCGAAAGCGAGGCGCCGGTCGCCATCCGCGAAGCCGGCGGCCTGCGCATCGGCCCGTCCTACCTCGAAGCGGCGCGCCAGCTGATCGCCTACAAGGAAAGCCTGACGTGA
PROTEIN sequence
Length: 606
MRPAALISWFIGLLVAAGASWLIWTRAADFLPLDLRQDLRFGVALLPLIVWAMVPVLFSRLFFKAAGPQESPTLRSHRRAAIAFLANRGVKGRRGRYAKPFFLLVGPPGSGKSSILERSDMRLGMPMTIGNSTWWVGPDAVFVETTFGMEEATTREVYDLLRSLRPKLPVNATLLTLSPADLTLADLAEQRSVMHAVTNSLRLLDEVTKTSIPAYLLLSKTDLVPGFREFFDRYEPQEREQPWGFILPYETMAKGKTAVERHAEIDKGFQDLLAAMRARHMEWLSREADPVRCGHLQGFSAQIAALQKTITPLLENLAPEHDRNWKGALMRGIFLTSARQEPLSIDALLPELSRRFAMPRIGMLPPDLGLDEEDQGYFITGVLKRIVIPEAGLVLRGKRRGAGFFLQWALIAATVLACLGSGYWIFRTFDEEIKFAGNLSDRLAVLKPVANPAKREDLPALLQSFRQLRQIEAALGTPRLAVAYPVPGLSVGPQLDKRFVLAERGLRVNALVFHLAARLEADLIDVNADVETLRKRLAVATDARNVDSPILLDWVAQNAASLAADDKATLESEAPVAIREAGGLRIGPSYLEAARQLIAYKESLT*