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SCNpilot_expt_1000_bf_scaffold_4379_curated_5

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: comp(6175..6510)

Top 3 Functional Annotations

Value Algorithm Source
Putative threonine efflux protein n=1 Tax=Rhizobium sp. CF142 RepID=J1SYV6_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 81.8
  • Coverage: 110.0
  • Bit_score: 185
  • Evalue 4.10e-44
Putative threonine efflux protein {ECO:0000313|EMBL:EJJ30448.1}; Flags: Precursor;; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.8
  • Coverage: 110.0
  • Bit_score: 185
  • Evalue 5.70e-44
lysine exporter protein LysE/YggA similarity KEGG
DB: KEGG
  • Identity: 80.0
  • Coverage: 110.0
  • Bit_score: 181
  • Evalue 1.40e-43

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Taxonomy

Rhizobium sp. CF142 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 336
ATGGTGGTGGAGCGTCCGCTGCAGCGTGGTCTTATCTTCGGTGTGACCAACCCGAAAGGATATCCCGTGGCGCTGGCGACCTTCACCGCGCTTCTGGCCGGTTCGGCCGATGCGCTGGAGCTGGAAACGTTGCCGATGCTGCTCGGCGTATCGCTCGTCGGGTTTCTGGTCGCCGATGCCATCCTGATCGCCATCATCGGCGCCCGCATCGTCCGGCAGTTCTATCGGGCGCACGAGCGGCTGATCGTGCGTCTGTCCGGTGTGCTGTTCATGGGATTTGCGGTGCAGGCCCTGTGGCACGCGGCGCCGGGCCTGTTGGGATGGCGCAAACCCTGA
PROTEIN sequence
Length: 112
MVVERPLQRGLIFGVTNPKGYPVALATFTALLAGSADALELETLPMLLGVSLVGFLVADAILIAIIGARIVRQFYRAHERLIVRLSGVLFMGFAVQALWHAAPGLLGWRKP*