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SCNpilot_expt_1000_bf_scaffold_1903_curated_26

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: comp(27650..28570)

Top 3 Functional Annotations

Value Algorithm Source
Putative glucose ABC transporter permease protein TsgC13 n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CVT6_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 89.5
  • Coverage: 306.0
  • Bit_score: 550
  • Evalue 1.30e-153
Putative glucose ABC transporter permease protein TsgC13 {ECO:0000313|EMBL:EYR79988.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.5
  • Coverage: 306.0
  • Bit_score: 550
  • Evalue 1.90e-153
putative ABC transporter; K02057 simple sugar transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 86.3
  • Coverage: 306.0
  • Bit_score: 532
  • Evalue 6.90e-149

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 921
ATGGGTATCGTCGAAGCCATCCTTTTGACCGTCATCACCGCCGCCACGCCGCTGGTGCTGGCCGCCATCGGCGAGCTGGTCACCGAGCGCTCCGGCGTCCTCAATCTCGGCGTCGAAGGCATGATGATCATGGGCGCGGCCCTGGCTTTTGCGGCAACGCAGGTGACCGGCTCGCCCTATATCGGCATCCTGGCCGGCATTGTCTGCGGCGCCCTGTTTTCTTTGCTCTTCGGTTTCCTCACCTTGACGCTGGTCGCCAACCAGGTGGCGACGGGCCTCGCCCTGACCATCCTCGGCCTCGGCATCTCCGGTCAGATCGGCGAACCCTATGTCGGCATGTCCGGCATCAAGCTGCAGCCGATCGCCATCCCCGTTCTTGCCGATATCCCCTTCATCGGCCCGCTGCTGTTCAGGCAGGACCTGATCTTCTACATCTCCATCGCCCTGATCATCGGCGTGCACTGGTTCCTGTTCCACAGCCGCGCCGGCCTCAAGCTTCGCGCCATCGGCGACAGCCATGGTTCGGCGCATGCGCTCGGCATCCATGTCATCCGCACGCGGTATCTGGCGGTGATGTTCGGCGGTGCCTGTGCCGGTCTCGCCGGCGCCCAGCTGTCGCTGGTCTATACGCCGCAATGGGTGGAAAACATGTCGGCCGGCCGCGGCTGGATCGCGCTGGCGCTGGTGGTCTTCGCCTCCTGGCGGCCGGGGCGGGTGCTGGCCGGCGGTTATCTCTTCGGGGCCGTGTCGATCAGCCAGCTGCATGCCCAGGCGCTCGGGATCGGCATCCCGTCGCAGTTCCTGTCGGCTCTTCCCTATGCGGCGACAATTGTCGTACTCATTCTCATATCTCACAATCGGCGCGTGACGCTGATCAATACGCCGGCATCGCTCGGCAAGCCGTTCGTGCCCGATCGTTGA
PROTEIN sequence
Length: 307
MGIVEAILLTVITAATPLVLAAIGELVTERSGVLNLGVEGMMIMGAALAFAATQVTGSPYIGILAGIVCGALFSLLFGFLTLTLVANQVATGLALTILGLGISGQIGEPYVGMSGIKLQPIAIPVLADIPFIGPLLFRQDLIFYISIALIIGVHWFLFHSRAGLKLRAIGDSHGSAHALGIHVIRTRYLAVMFGGACAGLAGAQLSLVYTPQWVENMSAGRGWIALALVVFASWRPGRVLAGGYLFGAVSISQLHAQALGIGIPSQFLSALPYAATIVVLILISHNRRVTLINTPASLGKPFVPDR*