name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_1000_bf_scaffold_1903_curated_1
Rhizobium sp. Pop5, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1..684
|
Excinuclease ABC subunit A (Fragment) n=1 Tax=Rhizobium sp. Pop5 RepID=K0VVL3_9RHIZ
Excinuclease ABC subunit A {ECO:0000313|EMBL:EJZ21535.1}; Flags: Fragment;; TaxID=1223565 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. Pop5.;"
uvrA; excinuclease ABC subunit A; K03701 excinuclease ABC subunit A
|
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SCNpilot_expt_1000_bf_scaffold_1903_curated_2
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1229..1936
|
hypothetical protein n=1 Tax=Rhizobium leguminosarum RepID=UPI00037A77AE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACI55026.1}; TaxID=395492 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii (strain WSM2304).;"
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SCNpilot_expt_1000_bf_scaffold_1903_curated_3
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2223..2957)
|
YjeF family protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LIE9_RHITR
YjeF family protein
YjeF family protein {ECO:0000313|EMBL:AGB71173.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
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SCNpilot_expt_1000_bf_scaffold_1903_curated_4
unknown
|
Not on your lists |
2998..3744
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_1903_curated_5
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
4035..4373
|
nitrogen regulatory protein P-II 1 n=1 Tax=Rhizobium giardinii RepID=UPI000367F490
glnB; nitrogen regulatory protein PII; K04751 nitrogen regulatory protein P-II 1
Nitrogen regulatory protein P-II {ECO:0000313|EMBL:EHH04309.1}; TaxID=1082932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens CCNWGS0286.;"
|
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SCNpilot_expt_1000_bf_scaffold_1903_curated_6
Rhizobium nepotum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
4430..5839
|
Glutamine synthetase {ECO:0000256|RuleBase:RU004356}; EC=6.3.1.2 {ECO:0000256|RuleBase:RU004356};; TaxID=1368418 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium nepotum 39/7.;"
Glutamine synthetase n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2297 RepID=J0W0T1_RHILT
|
|
SCNpilot_expt_1000_bf_scaffold_1903_curated_7
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(6101..7138)
|
hypothetical protein n=1 Tax=Rhizobium giardinii RepID=UPI000370B6D9
KDPG and KHG aldolase {ECO:0000313|EMBL:EYR79922.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
putative TRAP transporter solute receptor; K07080
|
|
SCNpilot_expt_1000_bf_scaffold_1903_curated_8
Hoeflea sp. BAL378, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7156..8535)
|
Uncharacterized protein n=1 Tax=Tsukamurella paurometabola (strain ATCC 8368 / DSM 20162 / JCM 10117 / NBRC 16120 / NCTC 13040) RepID=D5UUE4_TSUPD
Uncharacterized protein {ECO:0000313|EMBL:KGF67244.1}; TaxID=1547437 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BAL378.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_1903_curated_9
Rhizobium sp. PDO1-076, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
8819..9736
|
Uncharacterized protein n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4F503_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EHS52195.1}; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. PDO1-076.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_1903_curated_10
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9819..10148
|
Uncharacterized protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6V7Y3_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ENN87087.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
hemimethylated DNA binding protein
|
|
SCNpilot_expt_1000_bf_scaffold_1903_curated_11
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10228..10863)
|
Invasion protein B n=1 Tax=Agrobacterium tumefaciens CCNWGS0286 RepID=G6XYG0_RHIRD
Invasion-associated protein {ECO:0000313|EMBL:EPR21867.1}; TaxID=1336745 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium radiobacter DSM 30147.;"
Invasion protein B
|
|
SCNpilot_expt_1000_bf_scaffold_1903_curated_12
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
11135..12943
|
bicyclomycin resistance protein n=1 Tax=Rhizobium leguminosarum RepID=UPI000379E61E
ABC-type oligopeptide transport system, periplasmic component {ECO:0000313|EMBL:EJC66363.1}; Flags: Precursor;; TaxID=755176 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. viciae WSM1455.;"
peptide ABC transporter substrate-binding protein; K02035 peptide/nickel transport system substrate-binding protein
|
|
SCNpilot_expt_1000_bf_scaffold_1903_curated_13
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13029..13688
|
Putative dithiol-disulfide isomerase protein (Involved in polyketide biosynthesis) n=1 Tax=Rhizobium etli CNPAF512 RepID=F2AJ30_RHIET
Putative dithiol-disulfide isomerase protein (Involved in polyketide biosynthesis) {ECO:0000313|EMBL:EGE55516.1}; TaxID=993047 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli CNPAF512.;"
DSBA oxidoreductase
|
|
SCNpilot_expt_1000_bf_scaffold_1903_curated_14
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13805..14752
|
Uncharacterized protein n=1 Tax=Agrobacterium tumefaciens F2 RepID=F7U942_RHIRD
Uncharacterized protein {ECO:0000313|EMBL:EGP56838.1}; TaxID=1050720 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens F2.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_1903_curated_15
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(14792..15262)
|
Putative redox protein, regulator of disulfide bond formation n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2297 RepID=J0CIL5_RHILT
Putative redox protein, regulator of disulfide bond formation {ECO:0000313|EMBL:EJC79270.1}; TaxID=754762 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM2297.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_1903_curated_16
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15281..15703)
|
mfd; transcription-repair coupling factor; K03723 transcription-repair coupling factor (superfamily II helicase) [EC:3.6.4.-]
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=311403 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium radiobacter (strain K84 / ATCC BAA-868).;"
Transcription-repair-coupling factor n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4F4Z6_9RHIZ
|
|
SCNpilot_expt_1000_bf_scaffold_1903_curated_17
GWF1_Sphingomonadales_63_6_curated, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
16440..17957
|
Uncharacterized protein id=16912671 bin=RBG_16_Aminicenantes_63_16_plus species=Acidaminococcus sp. CAG:542 genus=Acidaminococcus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=RBG_16_Aminicenantes_63_16_plus organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate Resolve three similar GC_Cov Aminicentantes bins with ESOM
Tax=GWF1_Sphingomonadales_63_6_curated
|
|
SCNpilot_expt_1000_bf_scaffold_1903_curated_18
unknown
|
Not on your lists |
18679..18768
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_1903_curated_19
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18752..19069)
|
Uncharacterized protein n=3 Tax=Agrobacterium RepID=F0L674_AGRSH
hypothetical protein; K09159 hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EHJ97665.1}; TaxID=1107544 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens 5A.;"
|
|
SCNpilot_expt_1000_bf_scaffold_1903_curated_20
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19505..21610
|
ATP-dependent DNA helicase RecG {ECO:0000313|EMBL:AJC79304.1}; EC=3.6.4.12 {ECO:0000313|EMBL:AJC79304.1};; TaxID=1432049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli bv. phaseoli str. IE4803.;"
recGch; ATP-dependent DNA helicase RecG (EC:3.6.1.-); K03655 ATP-dependent DNA helicase RecG [EC:3.6.4.12]
ATP-dependent DNA helicase RecG n=1 Tax=Rhizobium sp. 42MFCr.1 RepID=UPI00037CFB8D
|
|
SCNpilot_expt_1000_bf_scaffold_1903_curated_21
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21611..22309)
|
membrane protein n=1 Tax=Rhizobium phaseoli RepID=UPI0003064C02
Uncharacterized protein {ECO:0000313|EMBL:EJC79266.1}; TaxID=754762 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM2297.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_1903_curated_22
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(22333..22827)
|
putative acetyltransferase; K03824 putative acetyltransferase [EC:2.3.1.-]
Putative acetyltransferase {ECO:0000313|EMBL:CCE95858.1}; EC=2.3.1.- {ECO:0000313|EMBL:CCE95858.1};; TaxID=1117943 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium fredii (strain HH103) (Sinorhizobium fredii).;"
Putative acetyltransferase n=1 Tax=Rhizobium fredii (strain HH103) RepID=G9A6H8_RHIFH
|
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SCNpilot_expt_1000_bf_scaffold_1903_curated_23
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(22824..24650)
|
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] {ECO:0000256|HAMAP-Rule:MF_00164, ECO:0000256|SAAS:SAAS00039584}; EC=2.6.1.16 {ECO:0000256|HAMAP-Rule:MF_00164};; D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; GFAT {ECO:0000256|HAMAP-Rule:MF_00164}; Glucosamine-6-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00164}; Hexosephosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; L-glutamine--D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_0016
glmS1; glucosamine--fructose-6-phosphate aminotransferase (EC:2.6.1.16); K00820 glucosamine--fructose-6-phosphate aminotransferase (isomerizing) [EC:2.6.1.16]
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CHY2_9RHIZ
|
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SCNpilot_expt_1000_bf_scaffold_1903_curated_24
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(24807..26165)
|
glmU; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase (EC:2.7.7.23 2.3.1.157); K04042 bifunctional UDP-N-acetylglucosamine pyrophosphorylase / Glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
N-acetylglucosamine-1-phosphate uridyltransferase n=1 Tax=Rhizobium phaseoli RepID=UPI000316A149
Bifunctional protein GlmU {ECO:0000256|HAMAP-Rule:MF_01631, ECO:0000256|SAAS:SAAS00083647}; TaxID=1408223 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. phaseoli CCGM1.;"
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SCNpilot_expt_1000_bf_scaffold_1903_curated_25
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(26536..27606)
|
Putative ABC transporter n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CFS9_9RHIZ
Putative ABC transporter {ECO:0000313|EMBL:EYR79987.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
basic membrane lipoprotein
|
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SCNpilot_expt_1000_bf_scaffold_1903_curated_26
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(27650..28570)
|
Putative glucose ABC transporter permease protein TsgC13 n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CVT6_9RHIZ
Putative glucose ABC transporter permease protein TsgC13 {ECO:0000313|EMBL:EYR79988.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
putative ABC transporter; K02057 simple sugar transport system permease protein
|
|
SCNpilot_expt_1000_bf_scaffold_1903_curated_27
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(28570..29658)
|
Glucose ABC transporter permease protein TsgB13 n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D4R2_9RHIZ
Glucose ABC transporter permease protein TsgB13 {ECO:0000313|EMBL:EYR79989.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
ABC transporter permease
|
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SCNpilot_expt_1000_bf_scaffold_1903_curated_28
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(29648..31222)
|
putative ABC transporter ATP-binding protein; K02056 simple sugar transport system ATP-binding protein [EC:3.6.3.17]
Putative sugar ABC transporter, ATP-binding protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D033_9RHIZ
Putative sugar ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EYR79990.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
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SCNpilot_expt_1000_bf_scaffold_1903_curated_29
Rhizobium sp. AP16, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(31258..32244)
|
qor; quinone oxidoreductase; K00344 NADPH2:quinone reductase [EC:1.6.5.5]
Zn-dependent oxidoreductase, NADPH:quinone reductase n=1 Tax=Rhizobium sp. AP16 RepID=J2LBJ5_9RHIZ
Zn-dependent oxidoreductase, NADPH:quinone reductase {ECO:0000313|EMBL:EJK84841.1}; TaxID=1144306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. AP16.;"
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SCNpilot_expt_1000_bf_scaffold_1903_curated_30
Rhizobium sp. LPU83, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(32249..32977)
|
Phosphatidylcholine synthase {ECO:0000256|PIRNR:PIRNR000851}; Short=PC synthase {ECO:0000256|PIRNR:PIRNR000851};; Short=PCS {ECO:0000256|PIRNR:PIRNR000851};; EC=2.7.8.24 {ECO:0000256|PIRNR:PIRNR000851};; CDP-diglyceride-choline O-phosphatidyltransferase {ECO:0000256|PIRNR:PIRNR000851}; TaxID=348824 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. LPU83.;"
phosphatidylcholine synthase; K01004 phosphatidylcholine synthase [EC:2.7.8.24]
phosphatidylcholine synthase n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI0003616804
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