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SCNpilot_expt_1000_bf_scaffold_1903_curated_30

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: comp(32249..32977)

Top 3 Functional Annotations

Value Algorithm Source
Phosphatidylcholine synthase {ECO:0000256|PIRNR:PIRNR000851}; Short=PC synthase {ECO:0000256|PIRNR:PIRNR000851};; Short=PCS {ECO:0000256|PIRNR:PIRNR000851};; EC=2.7.8.24 {ECO:0000256|PIRNR:PIRNR000851};; CDP-diglyceride-choline O-phosphatidyltransferase {ECO:0000256|PIRNR:PIRNR000851}; TaxID=348824 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. LPU83.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.7
  • Coverage: 241.0
  • Bit_score: 431
  • Evalue 9.90e-118
phosphatidylcholine synthase; K01004 phosphatidylcholine synthase [EC:2.7.8.24] similarity KEGG
DB: KEGG
  • Identity: 85.9
  • Coverage: 241.0
  • Bit_score: 428
  • Evalue 1.10e-117
phosphatidylcholine synthase n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI0003616804 similarity UNIREF
DB: UNIREF100
  • Identity: 87.1
  • Coverage: 241.0
  • Bit_score: 434
  • Evalue 8.40e-119

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Taxonomy

Rhizobium sp. LPU83 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 729
ATGAAGATTTTCAACTACAAGCGGGTGCCCTATGCCGAAATACGGGCATTTTCCGTGCATATCCTCACCGCCTCCGGCTCGTTCCTGGCCTTTCTCGGCGTCGTCGCCGCCGCGGAACATCGCTTCATCGACATGTTCTGGTGGCTCGGCCTGGCCCTGCTCGTCGATGGCATCGACGGCCCGATCGCCCGCAAGGTGAAGGTCAAGGAAGTTCTGCCCAACTGGTCGGGCGATACGCTCGACAACATCATCGATTATGTCACCTACGTGCTTTTGCCGGCCTTCGCGCTCTACCAGAGCGGCATGATCGGCGAGCCCTGGTCCTTTGCTGCGGCCGGCATGATCGTCGTGTCCAGCGCCATCTATTATGCCGACATGGGCATGAAGACCGACGAATATTTCTTCTCCGGCTTCCCGGTCGTCTGGAACATGGTGATCTTCACGCTGTTCGTGGTGCAGGCGAGCGCCCTGGCGGCGATGATCGTCGTGACGCTCTCCGTCATACTGACCTTCCTGCCGATCAATTTCCTGCATCCGGTGCGGGTGCAGCGGCTTCGGCCGCTCAACATGGTGCTTTTCGCCGTCTGGTCCATCCTCGGCATTGCGGCCTTGTTGATGCATTTCCAGACCCCGCTCTGGCTGAAGGTGCTCTTCTGCCTGACCGGGCTTTATCTCTATTGCATCGGGGCGGTGCTGCAACTCTTCCCCGCCCTTGGAAAAAGGATCTGA
PROTEIN sequence
Length: 243
MKIFNYKRVPYAEIRAFSVHILTASGSFLAFLGVVAAAEHRFIDMFWWLGLALLVDGIDGPIARKVKVKEVLPNWSGDTLDNIIDYVTYVLLPAFALYQSGMIGEPWSFAAAGMIVVSSAIYYADMGMKTDEYFFSGFPVVWNMVIFTLFVVQASALAAMIVVTLSVILTFLPINFLHPVRVQRLRPLNMVLFAVWSILGIAALLMHFQTPLWLKVLFCLTGLYLYCIGAVLQLFPALGKRI*