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SCNpilot_expt_1000_bf_scaffold_14735_curated_9

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: 5149..5364

Top 3 Functional Annotations

Value Algorithm Source
Cold shock protein CspB n=1 Tax=Rhodovulum sp. PH10 RepID=J5PCZ1_9RHOB similarity UNIREF
DB: UNIREF100
  • Identity: 74.6
  • Coverage: 71.0
  • Bit_score: 116
  • Evalue 8.70e-24
Cold shock protein CspB {ECO:0000313|EMBL:KFC74351.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.9
  • Coverage: 71.0
  • Bit_score: 129
  • Evalue 2.40e-27
putative cold shock protein, DNA binding, CspA-like protein similarity KEGG
DB: KEGG
  • Identity: 73.2
  • Coverage: 71.0
  • Bit_score: 112
  • Evalue 5.20e-23

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Taxonomy

Bosea sp. LC85 → Bosea → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 216
GTGAAGTGGTTCAACCGCCTGCGCGGCTTCGGCTTCGTCTCGAAGGGCGAGGGTGCGCCCGATATCTTCGTGCATATGGAGACGCTGCGCCGCTACGGCCTCGTCGAGCTGGTGCCGGGACAGACGGTGCTGGTGCGCTATGGCCCCGGACCGAAGGGGCTGATGGCTGCCGAGATTCATCTCGAGCAGGACGTGGCCGCGACGGCGGCGCACTGA
PROTEIN sequence
Length: 72
VKWFNRLRGFGFVSKGEGAPDIFVHMETLRRYGLVELVPGQTVLVRYGPGPKGLMAAEIHLEQDVAATAAH*