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SCNpilot_expt_1000_bf_scaffold_14735_curated

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_14735_curated_1
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..189
DNA (189bp) protein (63aa)
Putative D-galactarate dehydratase/Altronate hydrolase {ECO:0000313|EMBL:KFC74347.1}; EC=4.2.1.42 {ECO:0000313|EMBL:KFC74347.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
altronate hydrolase; K01685 altronate hydrolase [EC:4.2.1.7]
hypothetical protein, partial n=1 Tax=Chelatococcus sp. GW1 RepID=UPI000377A7A4
SCNpilot_expt_1000_bf_scaffold_14735_curated_2
unknown

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comp(208..321)
DNA (114bp) protein (38aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_14735_curated_3
unknown

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831..974
DNA (144bp) protein (48aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_14735_curated_4
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1385..1777
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Halomonas titanicae BH1 RepID=L9UBS2_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KFC74348.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
putative signal peptide
SCNpilot_expt_1000_bf_scaffold_14735_curated_5
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1910..2290)
DNA (381bp) protein (127aa)
Aspartate/tyrosine/aromatic aminotransferase n=1 Tax=Microvirga sp. WSM3557 RepID=I4Z015_9RHIZ
Aminotransferase class I {ECO:0000313|EMBL:KFC74349.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
class I and II aminotransferase
SCNpilot_expt_1000_bf_scaffold_14735_curated_6
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3197..3952
DNA (756bp) protein (252aa)
NAD-dependent protein deacetylase {ECO:0000313|EMBL:KFC74350.1}; EC=3.5.1.- {ECO:0000313|EMBL:KFC74350.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
silent information regulator protein Sir2; K12410 NAD-dependent deacetylase [EC:3.5.1.-]
NAD-dependent protein deacetylase, SIR2 family n=1 Tax=Microvirga sp. WSM3557 RepID=I4YY27_9RHIZ
SCNpilot_expt_1000_bf_scaffold_14735_curated_7
Burkholderia fungorum, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3949..4578)
DNA (630bp) protein (210aa)
Putative threonine efflux protein n=1 Tax=Burkholderia sp. BT03 RepID=J3AWX7_9BURK
LysE type translocator family protein {ECO:0000313|EMBL:AJZ60369.1}; TaxID=134537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia fungorum.;"
lysine exporter protein LysE/YggA
SCNpilot_expt_1000_bf_scaffold_14735_curated_8
unknown

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comp(4829..4978)
DNA (150bp) protein (50aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_14735_curated_9
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5149..5364
DNA (216bp) protein (72aa)
Cold shock protein CspB n=1 Tax=Rhodovulum sp. PH10 RepID=J5PCZ1_9RHOB
Cold shock protein CspB {ECO:0000313|EMBL:KFC74351.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
putative cold shock protein, DNA binding, CspA-like protein
SCNpilot_expt_1000_bf_scaffold_14735_curated_10
unknown

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comp(5494..5694)
DNA (201bp) protein (67aa)

This feature has no annotations

Displaying 10 items

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