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SCNpilot_expt_1000_bf_scaffold_1136_curated_16

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: comp(12331..12972)

Top 3 Functional Annotations

Value Algorithm Source
threonine transporter RhtB n=1 Tax=Rhizobium mongolense RepID=UPI0003B6341D similarity UNIREF
DB: UNIREF100
  • Identity: 66.7
  • Coverage: 207.0
  • Bit_score: 285
  • Evalue 4.20e-74
LysE family amino acid efflux protein {ECO:0000313|EMBL:AJD40493.1}; TaxID=1418105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium gallicum bv. gallicum R602.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.2
  • Coverage: 207.0
  • Bit_score: 287
  • Evalue 1.60e-74
lysine exporter protein LysE/YggA similarity KEGG
DB: KEGG
  • Identity: 66.2
  • Coverage: 207.0
  • Bit_score: 279
  • Evalue 7.30e-73

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Taxonomy

Rhizobium gallicum → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 642
ATGGACTACATGGGCAACCTCTGGCTTTTCCTCGTCCTGCTCTTCGGCATCATCATCGTGCCGGGCCTCGACATGCTGTTCGTCATGGCCAATGCGCTGACCAACGGCCGCAGCGCCGGATTTGCGGCGACCGCCGGCATCATGGCCGGCGGCGCGGTGCATACGCTCTACGGCGCGCTCGGCGCCGGCCTGATCGCCCGGTGGCTGCCGTGGCTCTTCGCGCCGATGCTGGTCGCCGGCGCCGCCTACATGATCTGGATCGGCTATACGCTGATACGCAGCTCCATCACCGTCGACGCCGTCGGCCGCAGCGACAGCCGTTCGCTGCGCACCGCCTTCCGCCAGGGGGCGCTCACCTGCCTGATCAATCCCAAGGCCTATATGTTCGTGCTCGCCGTCTATCCGCAGTTCGTCCGGCCGGACTACGGCCCGGTCTGGCAGAAGGCGCTGGTGATGGGCGTGATGACGGCGCTGATGCAGCTGCTCGTCTACGGCGCCGTGGCGCTGGCCGCCGGCAGGAGCCGCGATGCGCTGATCGCCAATCCCGCCGCGACCATCCTTGTCGGGCGCGGTGCCGGCCTGCTGCTCGTCGTCGTTGCCGCCGTCATGTTGTGGCAGAGCATCGGCAGCCATTTCGCCTGA
PROTEIN sequence
Length: 214
MDYMGNLWLFLVLLFGIIIVPGLDMLFVMANALTNGRSAGFAATAGIMAGGAVHTLYGALGAGLIARWLPWLFAPMLVAGAAYMIWIGYTLIRSSITVDAVGRSDSRSLRTAFRQGALTCLINPKAYMFVLAVYPQFVRPDYGPVWQKALVMGVMTALMQLLVYGAVALAAGRSRDALIANPAATILVGRGAGLLLVVVAAVMLWQSIGSHFA*