ggKbase home page

SCNpilot_expt_1000_bf_scaffold_1136_curated_29

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: comp(25239..27068)

Top 3 Functional Annotations

Value Algorithm Source
diguanylate cyclase n=1 Tax=Rhizobium leguminosarum RepID=UPI00036EA259 similarity UNIREF
DB: UNIREF100
  • Identity: 80.1
  • Coverage: 599.0
  • Bit_score: 987
  • Evalue 6.40e-285
sensory box/GGDEF family protein similarity KEGG
DB: KEGG
  • Identity: 80.2
  • Coverage: 597.0
  • Bit_score: 980
  • Evalue 3.20e-283
Putative sensory box/GGDEF family protein {ECO:0000313|EMBL:ACE90205.1}; TaxID=491916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli (strain CIAT 652).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.2
  • Coverage: 597.0
  • Bit_score: 980
  • Evalue 1.40e-282

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhizobium etli → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1830
ATGTTGATGGCGCAGCACACCGAACCTGAACTTTTGCGCCGCTATGCCAGCGACCAGCTGGTGACGCTCGCCAAGCTGGTGATCGAAAGCGCCTTCCAGCCGATCGTCGAAGCCGGCACGGGAACCGTCTTCGGTTACGAATCGCTGATGCGCGGTTTCGACCGGATGGGTTTCGATTCCCCGCTGGAAGTGCTCGACCAGGCCGACAAGACCGGCCAGCTGGTCGCGCTGGAGCAGATGCTGACCAGCCGGGCACTGGCGAAATTCGCCACCATCGAGGACTTCTCCTCCGCCACCCTGTTCCTCAACCTCGACGTCCGGCTGATTCGCCATGGCGAACGGCTGGTCGAAACCCTGCTGCAGCACCTGCGCAAGAACAACATCCCGCCGTCCTCGCTGTGCTTCGAGCTGTCGGAGCGGTTCGACAATACCAGCGTGCCGGAATTTTCGGCGCTGATCGCCACCATGCGCAAAGCGGGCTTCAAGCTCGCCATCGACGATTTCGGCGTCGGCCATGGCGAGATGAAATTGCTGTGCGACTATCCGGTCGATTATCTCAAGATCGACCGCCACTTCGTCGCCGATATCGACAAGAGCGCCCGCAAGCGCCACCTGTTCAAGAATTTCGTCAACATGGCGCATGTGCTCGGCATCCGCGTCATCGCCGAGGGCATCGAGACCGAGGCTGAATTCCTGGCCTGCCGCGAATATGGCGTCGATCTGGTGCAGGGCTGGTTCATCTCGCGCCCCACCACCTTCGTCTCCGAGCTGAAGCCGGCCTTCCCGCACCTGCGCGATCTCGGGACGATGAAGCGTTCCAGCCAGTCGCTCGACGAAATCCTCATCCGCAAGCAGATCGAGCGGCTGCCGACCGTTTACGAGAACGACAGCATCGAGGATGTCTTCGAACTGTTCCGGCGCAACCCGCGCCAGGCCTTCTTTCCGGTGCTGAACGCCAACGGCGAACCGCGCGGCATCATCAACGAATATCACCTGAAGGAATACATCTACCAGCCGTTCGGCCGCGACCTTTTGAAGAACAAGGTCTACGAACGCTCCATCTCGCAATTCGTCGACCGCGCGCCCACCGTCGGCCTGGATGCGGATGCGGAGCGGCTGATGGCGATCTTCGCCAACATGGACGGCAGCGACTGCGTCATCCTCACCGAGAACATGCGGTATGCCGGCGTCGTTTCCGCCGCCTCGCTGATCAAGGTCATCAACGAAAAGCAGCTGAAGACGGCGCAGGACCAGAACCCGCTGACCGGCCTGCCGGGCAACCGCGCCATCCGCGAGTTCATGCAGTCCGCCGGCCGCGACGGCGACGAAACCCGCTTCTTCTGCTATTGCGATTTCGACAACTTCAAGCCGTTCAACGATCATTACGGCTTCCATATCGGCGACCACGCCATCTCGCTTTTCGCGGCGCTGATGCGCCGCTATTTCTTCTCCGAGGGCGATTTCCTCGGTCATGTCGGCGGCGACGATTTCTTCATCGGCATCACCGGCTGGTCGACGGAAGAGATCACCGAAATCCTCGACCGCCTGCTTACCGATTTCCACGACGACGTGATCGACCTCTATACCGAGGAAGACCGCATCAACGGCTACATCAAGGGCCACGACCGCACCGGCAACGAGCGGATCTTCCAGCTGATGCGCTGCTCGATCGGCGTGCTGGAACTGCCGGCCGGCCTCGTCATCGACGACAGCGCCCGCGTCAGCGCCGAAATCGCCGCCGTCAAGGCGCGTGCCAAGAACAGCGACAGCGGCCTTGCCTTCCAGGTTTTTGGCGAAAATGACATGCAGAAACAAAGTGCCAGGACCTGA
PROTEIN sequence
Length: 610
MLMAQHTEPELLRRYASDQLVTLAKLVIESAFQPIVEAGTGTVFGYESLMRGFDRMGFDSPLEVLDQADKTGQLVALEQMLTSRALAKFATIEDFSSATLFLNLDVRLIRHGERLVETLLQHLRKNNIPPSSLCFELSERFDNTSVPEFSALIATMRKAGFKLAIDDFGVGHGEMKLLCDYPVDYLKIDRHFVADIDKSARKRHLFKNFVNMAHVLGIRVIAEGIETEAEFLACREYGVDLVQGWFISRPTTFVSELKPAFPHLRDLGTMKRSSQSLDEILIRKQIERLPTVYENDSIEDVFELFRRNPRQAFFPVLNANGEPRGIINEYHLKEYIYQPFGRDLLKNKVYERSISQFVDRAPTVGLDADAERLMAIFANMDGSDCVILTENMRYAGVVSAASLIKVINEKQLKTAQDQNPLTGLPGNRAIREFMQSAGRDGDETRFFCYCDFDNFKPFNDHYGFHIGDHAISLFAALMRRYFFSEGDFLGHVGGDDFFIGITGWSTEEITEILDRLLTDFHDDVIDLYTEEDRINGYIKGHDRTGNERIFQLMRCSIGVLELPAGLVIDDSARVSAEIAAVKARAKNSDSGLAFQVFGENDMQKQSART*