ggKbase home page

SCNpilot_expt_1000_bf_scaffold_7391_curated_11

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: 10821..11060

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal silencing factor RsfS n=1 Tax=Rhizobium etli (strain CIAT 652) RepID=B3PS02_RHIE6 similarity UNIREF
DB: UNIREF100
  • Identity: 87.3
  • Coverage: 79.0
  • Bit_score: 148
  • Evalue 3.00e-33
Ribosomal silencing factor RsfS {ECO:0000256|HAMAP-Rule:MF_01477}; TaxID=1509404 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. R2-400B4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.1
  • Coverage: 79.0
  • Bit_score: 155
  • Evalue 4.50e-35
hypothetical protein; K09710 ribosome-associated protein similarity KEGG
DB: KEGG
  • Identity: 87.3
  • Coverage: 79.0
  • Bit_score: 148
  • Evalue 9.50e-34

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhizobium sp. R2-400B4 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 240
ATGGTTGTCGTCTCCGGCCGTTCGAACAGGCATGTCGCCGCCATCAGCGACCACCTGATTTCCGACCTCAAGGAAGAGGGTTTGGGCAACGCTCGCGTCGAAGGTCTGGAAACCGGCGACTGGGTGCTGATTGACACGGGTGACATCATCGTCCACGTGTTCCGTCCCGAAATCCGCGAGTTCTACAACATCGAAAAGATGTGGGCTGCCCCGGATCTCGAAGAAGAGACGCGGCACTGA
PROTEIN sequence
Length: 80
MVVVSGRSNRHVAAISDHLISDLKEEGLGNARVEGLETGDWVLIDTGDIIVHVFRPEIREFYNIEKMWAAPDLEEETRH*