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SCNpilot_expt_1000_bf_scaffold_7391_curated_12

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: 11327..11626

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal RNA large subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_00658}; EC=2.1.1.177 {ECO:0000256|HAMAP-Rule:MF_00658};; 23S rRNA (pseudouridine1915-N3)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; 23S rRNA m3Psi1915 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; rRNA (pseudouridine-N3-)-methyltransferase RlmH {ECO:0000256|HAMAP-Rule:MF_00658}; TaxID=1432049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.9
  • Coverage: 99.0
  • Bit_score: 179
  • Evalue 2.80e-42
rRNA large subunit methyltransferase; K00783 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] similarity KEGG
DB: KEGG
  • Identity: 82.8
  • Coverage: 99.0
  • Bit_score: 176
  • Evalue 4.10e-42
Ribosomal RNA large subunit methyltransferase H n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D2A4_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 86.7
  • Coverage: 98.0
  • Bit_score: 178
  • Evalue 4.40e-42

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Taxonomy

Rhizobium etli → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 300
ATGCTGGAAAAGGCGTTGCCGGAAGGCGCCGTTCTCATTCTCCTCGACGAACGCGGCAAGGCGCTCGACAGCGAAGCCTTTGCCACGATGATCAGCCAGTACCGCGACAACGGCAAACGCGACCTGATGGTCGCTGTCGGCGGCGCCGACGGACTCGATCCGGCGCTCTACGACAGGGCGGACGCCACGCTCTGCCTCGGCAAGATGACCTGGCCGCACCAGCTGGTGCGTATTCTCATCGCCGAGCAGCTGTATCGCGCCGTCACCATCCTCTCCGGCCATCCCTATCACCGAATTTGA
PROTEIN sequence
Length: 100
MLEKALPEGAVLILLDERGKALDSEAFATMISQYRDNGKRDLMVAVGGADGLDPALYDRADATLCLGKMTWPHQLVRILIAEQLYRAVTILSGHPYHRI*