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SCNpilot_expt_1000_bf_scaffold_983_curated_10

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: comp(13937..15316)

Top 3 Functional Annotations

Value Algorithm Source
Type I secretion outer membrane protein, TolC family n=4 Tax=Rhizobium meliloti RepID=F6BME1_SINMB similarity UNIREF
DB: UNIREF100
  • Identity: 66.5
  • Coverage: 462.0
  • Bit_score: 576
  • Evalue 3.40e-161
TolC family type I secretion outer membrane protein; K12340 outer membrane channel protein similarity KEGG
DB: KEGG
  • Identity: 66.5
  • Coverage: 462.0
  • Bit_score: 576
  • Evalue 1.10e-161
Putative outer membrane secretion protein {ECO:0000313|EMBL:CDH85403.1}; TaxID=1401243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium meliloti RU11/001.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.5
  • Coverage: 462.0
  • Bit_score: 576
  • Evalue 4.70e-161

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Taxonomy

Sinorhizobium meliloti → Sinorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1380
GTGCCCATCATCCGTAAAGCTATTCTCGCTTCCGCCGTCGCCGCCCTGATGCTGGCACCGCATGCCGCTTCGGCCGAGACGATTTTCGGGGCAATGGCCAAGGCTTATGCCAACAACCCGGATCTGAATGCCGCCCGTGCCGCGCTGAGGGCAACCGACGAGAATGTCACGATCGCCAAGGCCGGGTTTCGGCCCCAGATCGAAGCGACCTCCAGCCTTACGGCCATCGGAGTTCGGGACATCAGCAACGGCGATGACGGCTACCAGTATAATACGGCATCGGTCGGTATCTCGATCACGCAAAGAATCTTCGACGGGTTCCAGACGCTGAACCGGGTTCGCCAGGCGGAATCATCCGTTCTTTCATCGCGCGAAACGGTCAAGGCCAACGAGATCCAGACATTGCTGGCCGCTGCCCAGGCTTATTCGAACGTCGCCCGCGACCAGCAGATCGTCGTCATCCGCCAGCAGAACCTGTCGTTTTTGCGCGAGCAGGTGAAGGCGGCGAATGCGCGCCTTGAAGTGGGCGAGGGCACGAGCACGGATGTCGCCCAGGCCGAAGCCCAGCTGGCGGCTTCGGAAGCGATTCTCGCGCAGGCGATTTCGCAATTGAAGATCGCCGAGGCGACCTATGTGCAGATCGTCGGTGTCATGCCGGAAGGGATCAAGCAACCGTCGCCGGCATCGAAGGCGATGCCGGGCGGTCTGGACAATGCCGTTGCGATTGCAATTCGCGAAAACCCGACCGTGCTCGCGGCCCTGCATGCCGTGGATGCTGCGGGATACCAGGTCAAGACAGCCGAAGGCGCGCTGTTGCCCGGCGTCGTCATCCGCGGATCCGTGCAGCGTCTGACCACCAGCGAGGCGCCTTCGGCGCTCAACCCCGATTACAACACCGGCTCCGTGACGGCGCAGATCACCGTACCGATCTACCAGGGCGGCGCCGAATACGGCCAGATCCGCCAGGCGAAGGAACAACTGGGCCAGCGTCGCATCCTCGTCGATTCCGCCCGCGCCGACGTGCAGCAGTCCGTGGTTGCCGCCTATGCGCAGATGGAAGCCGCCAAGGCGGCGATCGCGGCGAACAAGAAGCAGCTTGCCGCTGCGCAGCTTGCCTTGAACGGCGTCATCGAAGAGCGCAACGTCGGAACCTCGACGACGCTCGACGTGCTGACCTCGCAGCAGAACGTGCTCAACGCCCGCGAAAGCCTGGTTGCCTCGCAATACAACAGCGTCGTCGCCAGCTATTCAGTCATTGCCGCGACGGGGCGCCTGACAATTCGCGACCAGGGCCTGCAGGTTGCCGAATATCGCCCGGAAGAGCATTACGAGGCGGTCAAGGACAAGTGGTTCGGATTGCGGACGGTGGATGGCCGCTGA
PROTEIN sequence
Length: 460
VPIIRKAILASAVAALMLAPHAASAETIFGAMAKAYANNPDLNAARAALRATDENVTIAKAGFRPQIEATSSLTAIGVRDISNGDDGYQYNTASVGISITQRIFDGFQTLNRVRQAESSVLSSRETVKANEIQTLLAAAQAYSNVARDQQIVVIRQQNLSFLREQVKAANARLEVGEGTSTDVAQAEAQLAASEAILAQAISQLKIAEATYVQIVGVMPEGIKQPSPASKAMPGGLDNAVAIAIRENPTVLAALHAVDAAGYQVKTAEGALLPGVVIRGSVQRLTTSEAPSALNPDYNTGSVTAQITVPIYQGGAEYGQIRQAKEQLGQRRILVDSARADVQQSVVAAYAQMEAAKAAIAANKKQLAAAQLALNGVIEERNVGTSTTLDVLTSQQNVLNARESLVASQYNSVVASYSVIAATGRLTIRDQGLQVAEYRPEEHYEAVKDKWFGLRTVDGR*