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SCNpilot_expt_1000_bf_scaffold_1759_curated_27

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: comp(28876..29934)

Top 3 Functional Annotations

Value Algorithm Source
LacI family transcriptional regulator n=1 Tax=Rhizobium sp. JGI 0001005-H05 RepID=UPI000372EAD1 similarity UNIREF
DB: UNIREF100
  • Identity: 81.0
  • Coverage: 331.0
  • Bit_score: 551
  • Evalue 5.20e-154
Transcriptional regulator {ECO:0000313|EMBL:EJL58273.1}; Flags: Precursor;; TaxID=1144312 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF122.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.5
  • Coverage: 330.0
  • Bit_score: 551
  • Evalue 9.60e-154
putative transcriptional regulator, LacI family; K02529 LacI family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 80.4
  • Coverage: 331.0
  • Bit_score: 537
  • Evalue 4.20e-150

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Taxonomy

Rhizobium sp. CF122 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1059
ATGCCGAGAGGGAAGACGACCGACGTGTCCAGCATACCGAAATTTCCCGCCGCGAAGGGCAAGCCCACCCTGCGCACCATCGCGGAGCTGACCGGCCTTGCCGTGACCACGGTTTCCCGCGCGCTGAGCGATGCGCCGCAGATTTCCGCCGAGACCCGTCGTCGCGTTCACCAGGTGGCGTCCGAGATCGGCTATTCGCCGGATCGGGCCGCCCAGCGCCTGAAGACCGGGCGAACCAATGTCATCGCCGTGCTGCTCGAACCGCACGAGGAAATCCTCGGCTACGGCACCTCGATCATGGCCGGCGTCGCCAAGGCGATGCAGGGCACCGCCTACCACCTGATCGTCATGCCGAACCTGCTGCACGCCAGCAACATCGCCGCCGTCAGCTACATCATCCGCAACGGCATGGCCGACGGGCTGATCATCTCGCGCACCGAGCCGCTCGATCCGCGCGTCAAATTGCTGATGGAGAACGACTTTCCGTTCGTCACCCACGGCAGGACGGAGCTTTCGAGTTCCCACCCCTATGTCGATTACGACAATTTCACCTTCACCTACGAGGCCACCAAGCGGCTGATCGCCAAGGGAAGGCGCAAGCCGGCGCTGATCAGCGGTCCGTCGCAATTCACCTTCGCCAGCCATATCCTGCACGGCTTCATGACCGCTGTGCGTGAGGCCGGCTGCCCTTACGAGATCATCTCCGATATCGACCTCGACCATCCGGCCGGCGTCATCCGCGACCGGATCGCCACACGCTACCGGCAGGGCGATGCGCCGGATGCCTATATGTGCGGCGGTGAGGTCTGCGCGCTGGCGACGATCACCGGCATGAGCGATTGCGGCCTGACGCTCGGCGTCGAATACGACATCGTCGCCAAGCAGACCTCGCAGCTTCTTTCCGCCATTCAGCCCAAGGTCGAAAGCATCTACGAGGACCTGATGGCGACCGGCGAGCATATGGGCCGCATCCTGCAGAAACGCATTGCCGGCGAGACGGATATGCGGGAATTGCAGGTGTTGCTCTGTCCGCAGGTGCCGTTCGCGGACACGAAGTAA
PROTEIN sequence
Length: 353
MPRGKTTDVSSIPKFPAAKGKPTLRTIAELTGLAVTTVSRALSDAPQISAETRRRVHQVASEIGYSPDRAAQRLKTGRTNVIAVLLEPHEEILGYGTSIMAGVAKAMQGTAYHLIVMPNLLHASNIAAVSYIIRNGMADGLIISRTEPLDPRVKLLMENDFPFVTHGRTELSSSHPYVDYDNFTFTYEATKRLIAKGRRKPALISGPSQFTFASHILHGFMTAVREAGCPYEIISDIDLDHPAGVIRDRIATRYRQGDAPDAYMCGGEVCALATITGMSDCGLTLGVEYDIVAKQTSQLLSAIQPKVESIYEDLMATGEHMGRILQKRIAGETDMRELQVLLCPQVPFADTK*