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SCNpilot_expt_1000_bf_scaffold_1759_curated_28

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: 30244..31485

Top 3 Functional Annotations

Value Algorithm Source
sugar ABC transporter substrate-binding protein n=1 Tax=Agrobacterium sp. 224MFTsu3.1 RepID=UPI00035EE2E3 similarity UNIREF
DB: UNIREF100
  • Identity: 91.3
  • Coverage: 413.0
  • Bit_score: 772
  • Evalue 1.70e-220
Family 1 extracellular solute-binding protein {ECO:0000313|EMBL:CDN95168.1}; Flags: Precursor;; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.5
  • Coverage: 413.0
  • Bit_score: 774
  • Evalue 6.20e-221
extracellular solute-binding protein; K02027 multiple sugar transport system substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 87.0
  • Coverage: 414.0
  • Bit_score: 743
  • Evalue 3.40e-212

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Taxonomy

Agrobacterium tumefaciens → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1242
ATGCGCAAGTTTTTGACGACGACGGCAGTAGCATTGGCAATGATGGCAGGCGCCGCACAGGCTGCCGAGAACGTGGAAGTCCTGCACTGGTGGACGTCTGGCGGTGAAGCTGCCGCGCTCGACGTCCTCAAGAAGGACCTCGAAGGCAAGGGCATTTCCTGGACCGACATGCCGGTCGCCGGCGGCGGCGGCACGGAAGCCATGACCGTCCTGCGCGCCCGCGTTACGGCCGGCAACGCGCCGACCGCCGTGCAGATGCTCGGTTTCGACATTCTCGACTGGGCCAAGGAAGGCGCACTCGGCAATCTCGACGAGGTCGCTGCCAAGGAAGGCTGGGACAAGGTGATCCCGGGCGCCCTGCAGCAGTTCTCGAAGTATGACGGCCACTGGATCGCCGCGCCGGTCAACGTTCACTCCACCAACTGGATGTGGATCAACAAGGCTGCCCTCGACAAGGCCGGCGGCAAGGAGCCGCAGAACTGGGACGAACTCGTCGCCCTGCTCGACAACTTCAAGGAACAGGGCATCACGCCGATCGCCCATGGCGGCCAGCCGTGGCAGGATGCGACGATCTTCGACGCCGTCGTTCTTTCGCTCGGCACCGACTTCTACAAGAGCGCCTTCATCGATCTCGACCCGGCGGCTCTCGGCGGCGACAAGATGAAGACCGCTTTCGAGCGCATGACCAAGCTGCGGTCCTACGTCGACGATAACTTCTCGGGCCGCGACTGGAACCTGGCATCCGCCATGGTCATCGAAGGCAAGGCCGGCGTCCAGTTCATGGGCGACTGGGCGAAGGGCGAGTTCGTCAAGGCCAACAAGGTGCCCGGCACCGACTTCGTCTGCATCCGTTATCCGGAAACGCAGGGCGCCGTGACCTTCAACTCCGACCAGTTCGCGATGTTCAAGGTTGCCGACGACAAGATCCCGGCGCAGATGGCCATGGCTTCGGCAATCGAAAGCCCGGTCTTCCAGTCGGCCTTCAACGTCGTCAAGGGTTCGGCTCCGGCACGCACCGACGTGTCCAACGAAGCCTTCGACGCTTGCGGCAAGAAGGCGATCGCCGACCTCGCAGACGCCGACAAGAACGGCAAGCTGTTCGGCTCGATGGCACACGGCCATGCCAACCCGGCTGCCGTCAAGAACGCCATCTACGACGTCGTGACCCGCGAATTCAACGGCGAACTGACGGCCGAAGATGCCGTGAAGGAACTGGCTGCGGCCGTCGAGGCTGCGAAGTAA
PROTEIN sequence
Length: 414
MRKFLTTTAVALAMMAGAAQAAENVEVLHWWTSGGEAAALDVLKKDLEGKGISWTDMPVAGGGGTEAMTVLRARVTAGNAPTAVQMLGFDILDWAKEGALGNLDEVAAKEGWDKVIPGALQQFSKYDGHWIAAPVNVHSTNWMWINKAALDKAGGKEPQNWDELVALLDNFKEQGITPIAHGGQPWQDATIFDAVVLSLGTDFYKSAFIDLDPAALGGDKMKTAFERMTKLRSYVDDNFSGRDWNLASAMVIEGKAGVQFMGDWAKGEFVKANKVPGTDFVCIRYPETQGAVTFNSDQFAMFKVADDKIPAQMAMASAIESPVFQSAFNVVKGSAPARTDVSNEAFDACGKKAIADLADADKNGKLFGSMAHGHANPAAVKNAIYDVVTREFNGELTAEDAVKELAAAVEAAK*