ggKbase home page

SCNpilot_expt_1000_bf_scaffold_1546_curated_14

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: 10103..11365

Top 3 Functional Annotations

Value Algorithm Source
Major facilitator superfamily MFS-1 n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D0G1_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 67.1
  • Coverage: 410.0
  • Bit_score: 578
  • Evalue 4.80e-162
Major facilitator superfamily MFS-1 {ECO:0000313|EMBL:EYR83674.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.1
  • Coverage: 410.0
  • Bit_score: 578
  • Evalue 6.70e-162
major facilitator superfamily protein similarity KEGG
DB: KEGG
  • Identity: 68.6
  • Coverage: 405.0
  • Bit_score: 576
  • Evalue 7.40e-162

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1263
ATGAGTCAACCGAAGGAGGAAACGGGATCGGTTCTGTCGATCTTCAGCATCATCGTGTCGATGACCGGCGTGGCGCTGGGCAACGGCATGATGCTGGCCTACGTGCCCTTCCTGCTGGCCCGCAACGAGGCGCCGTCCTGGATTGCCGGTGCGACGTTGACGGCGATCGCCTTTGGCGGTTTCGTCGGCTGCGCGGTGACCGGACTGCTGATCCGACGTGTCGGCCACGCCCGGCTGCTGCCCTGCTCGTTTGCCGTCGTGATCCTGTCGGCGATCCTGATCGGCTTCGGCGTCAATCCGTTGCTCTGGGTGTTCGCCCGCGGGCTTTATGGCGCCGCGGCCAATACCAATTTCATCATCGCCCAGAGCTGGCTCAACCACGCCTCGTCGAATGCCTGGCGCGGCAGGGCGATGTCGGTCTTCTACATGACCTATGTGATCGGCATCGGTACGGGCGCCTGGATTTTCGGGCAGATCCCGGCGGACGGCAACATGGCGCCGATGCTGACGGTGCTGTTCACGACACTCGGCATCATCCCCATCAGCCTGACGCGGCTGCCGATCCCGCCGGCTCCGGCAAAGGTCAGCGTCGACATCGCCATGGCCTGGCGCAATTCGCCGGTCGCCTTCGTCGGCGTGCTTGCCGCTGGCGGGCTATCGATGGTGGTGCAGGGGTTCACGCCGATCTATGCCGCCGAAAACAACGTTTCGCAGCAGGATGTGGCGCTCTTGATGTTCTGCATGCAGTTCGGCCTGATCTTCATCCAGTATCCCATGGGGGTGATGTCCGATCGCGTCGATCGCCGCTACGTGCTGATCGGCGTCTGCACGCTGATTGCGGTCGCCGGTGTCGCCTCGCTGTTCGTCTCCTTTGCCAGCCTGTTGCTGCTGATGCTGGTTTTCACCATCTGGGCCGGGGCGGTGGAGACGGTCTATTCGATCGCCAACGCCCACGGCAACGACCGCACCGATCCCAAGGACTTCGTGCCGCTGGCCAGCACGCAGCTGCTCGCCTGGTCGATCTCCGCGACGCTGGCGCCGCTCGCCGTGACGCTGATCACGCCCGCCTTCGGGCCGAAAACCTTCATCTACGTCGCGATCGCGCTTGCCGTCGCTTATGCGATCTTTGTTGCGTTGCGCCTGTGCGAGCGGCCGCGGGCGCCGGAAGAGGCGCGCGAAACCTTCGAGATGATGACGGCGCAGGTGCCGAATGCCGCCGGGCTCACCGATCCGCCAGCCGGCGATACCGCCCGCAACGGCTGA
PROTEIN sequence
Length: 421
MSQPKEETGSVLSIFSIIVSMTGVALGNGMMLAYVPFLLARNEAPSWIAGATLTAIAFGGFVGCAVTGLLIRRVGHARLLPCSFAVVILSAILIGFGVNPLLWVFARGLYGAAANTNFIIAQSWLNHASSNAWRGRAMSVFYMTYVIGIGTGAWIFGQIPADGNMAPMLTVLFTTLGIIPISLTRLPIPPAPAKVSVDIAMAWRNSPVAFVGVLAAGGLSMVVQGFTPIYAAENNVSQQDVALLMFCMQFGLIFIQYPMGVMSDRVDRRYVLIGVCTLIAVAGVASLFVSFASLLLLMLVFTIWAGAVETVYSIANAHGNDRTDPKDFVPLASTQLLAWSISATLAPLAVTLITPAFGPKTFIYVAIALAVAYAIFVALRLCERPRAPEEARETFEMMTAQVPNAAGLTDPPAGDTARNG*