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SCNpilot_expt_1000_bf_scaffold_975_curated_28

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: comp(27245..27574)

Top 3 Functional Annotations

Value Algorithm Source
Pectin degradation protein n=1 Tax=Rhizobium grahamii CCGE 502 RepID=S3HHK5_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 87.2
  • Coverage: 109.0
  • Bit_score: 200
  • Evalue 1.20e-48
Pectin degradation protein {ECO:0000313|EMBL:EPE98312.1}; TaxID=990285 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium grahamii CCGE 502.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.2
  • Coverage: 109.0
  • Bit_score: 200
  • Evalue 1.70e-48
Cupin 2 barrel domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 63.0
  • Coverage: 100.0
  • Bit_score: 128
  • Evalue 1.10e-27

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Taxonomy

Rhizobium grahamii → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 330
ATGCAATCCAACCACACCCTGCCCGAAGACACCGTCTGGACGGAGGTTTCGCCCGGCAATCGCCGCGCCGTCCTCAGCCATCGCCCGGAAATGATGCTCGTCGCCTTCAGCTTCGACGAAGGCGCCATCGGCGCCCTGCATTCGCACCCGCACACGCAGGTGAGTTATGTCGCCGAAGGCAGCTTCGACGTCACGATCGACGGCGTGACCACCCGGCTCGACGCCGGCAGCAGCTTCATCGTTGCCCCCAATCTCGTCCACGGTGTGGTGGCGCTCGGCAAGGGGTTGCTGATCGACACGTTCACGCCGCGCCGCGACGACTTCCTGTAA
PROTEIN sequence
Length: 110
MQSNHTLPEDTVWTEVSPGNRRAVLSHRPEMMLVAFSFDEGAIGALHSHPHTQVSYVAEGSFDVTIDGVTTRLDAGSSFIVAPNLVHGVVALGKGLLIDTFTPRRDDFL*