name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_1000_bf_scaffold_975_curated_1
Agrobacterium arsenijevicii, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2..448)
|
metH; B12-dependent homocysteine-N5-methyltetrahydrofolate transmethylase (EC:2.1.1.13)
B12-dependent methionine synthase n=1 Tax=Agrobacterium tumefaciens 5A RepID=H0H7G1_RHIRD
Methionine synthase {ECO:0000313|EMBL:KJF74210.1}; TaxID=1585697 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium sp. KFB 330.;"
|
|
SCNpilot_expt_1000_bf_scaffold_975_curated_2
Rhizobium sp. AP16, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
630..1892
|
N-acyl-D-glucosamine 2-epimerase n=1 Tax=Rhizobium sp. AP16 RepID=J2WPR9_9RHIZ
N-acyl-D-glucosamine 2-epimerase {ECO:0000313|EMBL:EJK84245.1}; TaxID=1144306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. AP16.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_975_curated_3
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2297..3121
|
Phage protein n=1 Tax=Agrobacterium tumefaciens F2 RepID=F7UGI9_RHIRD
Phage protein {ECO:0000313|EMBL:EGP54844.1}; TaxID=1050720 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens F2.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_975_curated_4
unknown
|
Not on your lists |
3435..3650
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_975_curated_5
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
4120..5274
|
Integrase family protein n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EGP6_9RHIZ
Integrase family protein {ECO:0000313|EMBL:CCV03308.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
integrase family protein
|
|
SCNpilot_expt_1000_bf_scaffold_975_curated_6
Mesorhizobium sp. LNHC229A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5333..5668)
|
UPI0003CDEBAF related cluster n=1 Tax=unknown RepID=UPI0003CDEBAF
DNA-binding protein {ECO:0000313|EMBL:ESY92819.1}; TaxID=1287240 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC229A00.;"
XRE family transcriptional regulator
|
|
SCNpilot_expt_1000_bf_scaffold_975_curated_7
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5859..6494)
|
UPI0003CF0DD5 related cluster n=1 Tax=unknown RepID=UPI0003CF0DD5
Transposase {ECO:0000313|EMBL:ESW80770.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
transposase
|
|
SCNpilot_expt_1000_bf_scaffold_975_curated_8
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7269..7475)
|
DNA gyrase inhibitor YacG n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LQZ7_RHITR
DNA gyrase inhibitor YacG {ECO:0000256|HAMAP-Rule:MF_00649, ECO:0000256|SAAS:SAAS00085446}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizobium galegae.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_975_curated_9
Rhizobium sp. AP16, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7478..8098)
|
Maf-like protein PMI03_04741 n=1 Tax=Rhizobium sp. AP16 RepID=J2WDB1_9RHIZ
Maf-like protein PMI03_04741 {ECO:0000256|HAMAP-Rule:MF_00528}; TaxID=1144306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. AP16.;"
maf; Maf-like protein; K06287 septum formation protein
|
|
SCNpilot_expt_1000_bf_scaffold_975_curated_10
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8136..8354)
|
Translation initiation factor IF-1 n=4 Tax=Rhizobium/Agrobacterium group RepID=B9JB05_AGRRK
infA; translation initiation factor IF-1
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=359 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium rhizogenes.;"
|
|
SCNpilot_expt_1000_bf_scaffold_975_curated_11
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8485..8952)
|
protein-tyrosine-phosphatase protein (EC:3.1.3.48)
Protein tyrosine phosphatase n=1 Tax=Rhizobium sp. CCGE 510 RepID=J5PTI8_9RHIZ
Protein-tyrosine-phosphatase {ECO:0000313|EMBL:EJC82486.1}; TaxID=754762 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM2297.;"
|
|
SCNpilot_expt_1000_bf_scaffold_975_curated_12
Rhizobium sp., Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8963..9367)
|
UPF0262 protein NT26_0187 n=1 Tax=Rhizobium sp. RepID=L0NAV9_RHISP
UPF0262 protein NT26_0187 {ECO:0000256|HAMAP-Rule:MF_00678}; TaxID=391 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_975_curated_13
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9446..10744)
|
Histidinol dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099}; Short=HDH {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; EC=1.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
Histidinol dehydrogenase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LR02_RHITR
hisD; histidinol dehydrogenase
|
|
SCNpilot_expt_1000_bf_scaffold_975_curated_14
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10787..11221)
|
Uncharacterized protein n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2PYC4_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EKF57735.1}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium albertimagni AOL15.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_975_curated_15
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11341..12678)
|
UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344}; EC=2.5.1.7 {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344};; Enoylpyruvate transferase {ECO:0000256|HAMAP-Rule:MF_00111}; UDP-N-acetylglucosamine enolpyruvyl transferase {ECO:0000256|HAMAP-Rule:MF_00111}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;
UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=1 Tax=Rhizobium freirei PRF 81 RepID=N6UBJ1_9RHIZ
UDP-N-acetylglucosamine 1-carboxyvinyltransferase
|
|
SCNpilot_expt_1000_bf_scaffold_975_curated_16
Aureimonas altamirensis, Aureimonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(13665..14600)
|
hypothetical protein n=1 Tax=Rhizobium loti RepID=UPI000375C0EA
3-keto-5-aminohexanoate cleavage protein {ECO:0000313|EMBL:KHJ54078.1}; TaxID=370622 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Aureimonas.;" source="Aureimonas altamirensis.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_975_curated_17
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(14633..15580)
|
3-hydroxyacyl-CoA dehydrogenase {ECO:0000313|EMBL:ESZ30092.1}; EC=1.1.1.35 {ECO:0000313|EMBL:ESZ30092.1};; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
UPI0003D01DE0 related cluster n=1 Tax=unknown RepID=UPI0003D01DE0
3-hydroxyacyl-CoA dehydrogenase NAD-binding protein
|
|
SCNpilot_expt_1000_bf_scaffold_975_curated_18
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15629..17713)
|
Inner-membrane translocator n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7Y4P5_MESOW
inner-membrane translocator
Inner-membrane translocator {ECO:0000313|EMBL:AEH88448.1}; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
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SCNpilot_expt_1000_bf_scaffold_975_curated_19
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(17710..19242)
|
ABC transporter; K02056 simple sugar transport system ATP-binding protein [EC:3.6.3.17]
Ribose import ATP-binding protein rbsA 1 n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F6W2_9RHIZ
ABC transporter family protein {ECO:0000313|EMBL:AID30500.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
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|
SCNpilot_expt_1000_bf_scaffold_975_curated_20
Aureimonas altamirensis, Aureimonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(19319..20446)
|
UPI0003D0306F related cluster n=1 Tax=unknown RepID=UPI0003D0306F
Sugar ABC transporter substrate-binding protein {ECO:0000313|EMBL:KHJ54083.1}; TaxID=370622 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Aureimonas.;" source="Aureimonas altamirensis.;"
sugar ABC transporter periplasmic ligand binding protein
|
|
SCNpilot_expt_1000_bf_scaffold_975_curated_21
Sagittula stellata, Sagittula, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
21054..21620
|
Transcriptional regulator, GntR family protein n=1 Tax=Sagittula stellata E-37 RepID=A3K770_9RHOB
GntR family transcriptional regulator
Transcriptional regulator, GntR family protein {ECO:0000313|EMBL:EBA06829.1}; TaxID=388399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sagittula.;" source="Sagittula stellata E-37.;"
|
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SCNpilot_expt_1000_bf_scaffold_975_curated_22
Burkholderia jiangsuensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21676..22602)
|
SMP-30/Gluconolaconase/LRE domain protein n=1 Tax=Burkholderia graminis C4D1M RepID=B1G5Z5_9BURK
Calcium-binding protein {ECO:0000313|EMBL:KAK42915.1}; TaxID=1458357 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia jiangsuensis.;"
putative calcium-binding protein
|
|
SCNpilot_expt_1000_bf_scaffold_975_curated_23
Devosia psychrophila, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
22835..23584
|
Cyclase family protein n=1 Tax=Rhizobium sp. Pop5 RepID=K0VLW7_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KKC33419.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_975_curated_24
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
23733..24521
|
fabG; 3-ketoacyl-ACP reductase (EC:1.1.1.100)
Short chain dehydrogenase n=2 Tax=Rhodobacter RepID=Q3IVE1_RHOS4
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:CDX14578.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
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SCNpilot_expt_1000_bf_scaffold_975_curated_25
unknown
|
Not on your lists |
24691..25281
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_975_curated_26
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
25441..25677
|
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CZ48_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR83215.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
|
|
SCNpilot_expt_1000_bf_scaffold_975_curated_27
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(25795..26934)
|
Methyl-accepting chemotaxis protein n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TVG4_9PROT
Methyl-accepting chemotaxis protein {ECO:0000313|EMBL:CAM74621.1}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense.;"
methyl-accepting chemotaxis sensory transducer; K03406 methyl-accepting chemotaxis protein
|
|
SCNpilot_expt_1000_bf_scaffold_975_curated_28
Rhizobium grahamii, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(27245..27574)
|
Pectin degradation protein n=1 Tax=Rhizobium grahamii CCGE 502 RepID=S3HHK5_9RHIZ
Pectin degradation protein {ECO:0000313|EMBL:EPE98312.1}; TaxID=990285 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium grahamii CCGE 502.;"
Cupin 2 barrel domain-containing protein
|
|
SCNpilot_expt_1000_bf_scaffold_975_curated_29
Rhizobium grahamii, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(27586..28341)
|
kduD; 2-deoxy-D-gluconate 3-dehydrogenase; K00065 2-deoxy-D-gluconate 3-dehydrogenase [EC:1.1.1.125]
hypothetical protein n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI0003722D71
2-deoxy-D-gluconate 3-dehydrogenase {ECO:0000313|EMBL:EPE98313.1}; TaxID=990285 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium grahamii CCGE 502.;"
|
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SCNpilot_expt_1000_bf_scaffold_975_curated_30
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(28338..29180)
|
5-keto 4-deoxyuronate isomerase (EC:5.3.1.17)
4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase {ECO:0000256|HAMAP-Rule:MF_00687}; EC=5.3.1.17 {ECO:0000256|HAMAP-Rule:MF_00687};; 5-keto-4-deoxyuronate isomerase {ECO:0000256|HAMAP-Rule:MF_00687}; DKI isomerase {ECO:0000256|HAMAP-Rule:MF_00687}; TaxID=1286640 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium meliloti (strain Sm2011 / Rm2011 / 2011).;"
4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase n=1 Tax=Sinorhizobium meliloti GR4 RepID=M4IM10_RHIML
|