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SCNpilot_expt_1000_bf_scaffold_1062_curated_23

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: comp(30860..31498)

Top 3 Functional Annotations

Value Algorithm Source
TetR family transcriptional regulator n=1 Tax=Pseudomonas sp. (strain M1) RepID=L1HXU3_PSEUO similarity UNIREF
DB: UNIREF100
  • Identity: 51.7
  • Coverage: 203.0
  • Bit_score: 216
  • Evalue 2.40e-53
TetR family transcriptional regulator {ECO:0000313|EMBL:KES21671.1}; TaxID=1502784 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. AAC.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 51.7
  • Coverage: 203.0
  • Bit_score: 216
  • Evalue 3.40e-53
putative TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 47.8
  • Coverage: 203.0
  • Bit_score: 205
  • Evalue 2.30e-50

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Taxonomy

Pseudomonas sp. AAC → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 639
TTGGCAAAGCAGTCAGTGGCGAAGGGAAGGGCGCGGTTTCGGCGCGAGGCTCCCGAGGACAGGCGGCGCCAGCTCGGAGAGGCGGCCCTGCGGTGCATTGTCAAGCACGGCAATGCCGGCGTGTCCGTTCGCCAGATCGCGGCGGAAGCGGGGGTGACCCAAGGCCTGATCACCCATCATTTCGGCGAGATCAACGAACTCGTCGCCTATGCATTCGACATCATGTCGGCCGGCATATTACAGGTGCTGATGAAGGGCGTTGAAGAGGCCGAGCCGACGCCGCAGAAGCGGCTCGACAGTTTCATCGAGTTGTCTTTCTCGCCGTTGCTGTTCGACCGCGACGTGCTCGGCGTCTGGGTGGTGTTCTGGGGGCTGATCCTGCATTCGCCGCGTATGAGCGCCTCGCAGCAGGGGGAATATTCCGACTACGTCGTCACCGTGGAGGGGCTTCTCCGCGATCTGGCCCAAGACGAGGGCTTTTCCATCGGAGACATCCGGCTGACGGCCATTGCATTCACCGCGCTTCTCGACGGGCTCTGGCTTGCCTGGTGCTTGAACCCTGCTTCCTTCAAGCCCGAGCAGGGCGTTCAGCTGTGCCGCAACTGGGTCGAGGGACTGCGCCGCGGCGCTTACGGCTGA
PROTEIN sequence
Length: 213
LAKQSVAKGRARFRREAPEDRRRQLGEAALRCIVKHGNAGVSVRQIAAEAGVTQGLITHHFGEINELVAYAFDIMSAGILQVLMKGVEEAEPTPQKRLDSFIELSFSPLLFDRDVLGVWVVFWGLILHSPRMSASQQGEYSDYVVTVEGLLRDLAQDEGFSIGDIRLTAIAFTALLDGLWLAWCLNPASFKPEQGVQLCRNWVEGLRRGAYG*