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SCNpilot_expt_1000_bf_scaffold_1062_curated_29

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: 39002..39460

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter ATP-binding protein n=1 Tax=Amycolatopsis benzoatilytica RepID=UPI000379464C similarity UNIREF
DB: UNIREF100
  • Identity: 52.6
  • Coverage: 116.0
  • Bit_score: 113
  • Evalue 2.70e-22
Oligopeptide transport ATP-binding protein AppD {ECO:0000313|EMBL:ETW11427.1}; TaxID=1317118 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseivivax.;" source="Roseivivax atlanticus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.0
  • Coverage: 118.0
  • Bit_score: 114
  • Evalue 1.70e-22
peptide ABC transporter ATP-binding protein similarity KEGG
DB: KEGG
  • Identity: 48.8
  • Coverage: 123.0
  • Bit_score: 109
  • Evalue 1.20e-21

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Taxonomy

Roseivivax atlanticus → Roseivivax → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 459
ATGACCGCCCCGGTTCTCGATCTGCACGGCCTCTCGGTCAATTACGGCGGCGTCTTCCCGGCGGTCATCGGCGTCGATCTCGCCGTCCGGCCGGGCGAGATCGTCGGCATCATCGGGGAAAGCGGCTCAGGCAAATCGACGCTCGCCCATGCGGCGCTCGGCCTGCTGCCCAAGGTCGCCCGCGTCTCGGGCGACCGGTTCATGCTCGCCGGCAACGACATGCTGACGGCCGGCCGCAACACGCTGGCAAGGCTGCGCGGCCCGGCGGCGGCGATGATCTTCCAGAACCCGATGACGGCCTTCAGCCCGGTCCACACGCTCGGCCGGCAATTGCGCGACCTGCTCTGGCGCGATCGCGATCAACAAAAAGCGNNNNNNNNNNNNNNNNNCTGGATGCCTATCCCTTCCAGCTCTCGGGCGGCATGCTGCAGCGGGTGGCGATCGCCGCCACGCTGCTGA
PROTEIN sequence
Length: 153
MTAPVLDLHGLSVNYGGVFPAVIGVDLAVRPGEIVGIIGESGSGKSTLAHAALGLLPKVARVSGDRFMLAGNDMLTAGRNTLARLRGPAAAMIFQNPMTAFSPVHTLGRQLRDLLWRDRDQQKAXXXXXXWMPIPSSSRAACCSGWRSPPRC*