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SCNpilot_expt_1000_bf_scaffold_3175_curated_3

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: comp(1472..2338)

Top 3 Functional Annotations

Value Algorithm Source
UPI0003CFBE3D related cluster n=1 Tax=unknown RepID=UPI0003CFBE3D similarity UNIREF
DB: UNIREF100
  • Identity: 58.7
  • Coverage: 288.0
  • Bit_score: 323
  • Evalue 1.90e-85
LysR family transcriptional regulator {ECO:0000313|EMBL:CDX42485.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.2
  • Coverage: 281.0
  • Bit_score: 331
  • Evalue 9.70e-88
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 59.7
  • Coverage: 278.0
  • Bit_score: 321
  • Evalue 2.30e-85
  • rbh

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Taxonomy

Mesorhizobium plurifarium → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 867
ATGCGGCTTGAAAGCGATATGCTGCGCACCTTCGTGGCAGTGGCCGAAACCGGCAATTTTACCCGTGCCGCCGATCTTTCCGGGCGGACGCAATCGGCGGTCAGCATCCAGATCAAGAAGCTGGAAGAGACGATCGGCGACCTTTTGTTCGAGCGGGGATCACGCGGCGTGACGCTGACGGCCAAGGGACGGCAGTTGCTCGGTTATGCCCGCCGCGTCATGGCACTGCTGGACGAGGCGGCGGCATCGCTGAAGGCGCCGCGTTTGCACGGCGTGGTGCGAATCGGCATTCCCGAGGAATATGGCCATTCGATCCTGCCAAAAGTGCTCGGCCGCTTCGACATGATGCATCCGGATGTCGAGGTGACGGTGCAATATGGCAGTTCGCGTGCCAATGCCGCTGCCCTGGCCAAGGGAGAACTGGATATCGCCGTCGTCTTCGAGCAGGCGAGCAACACGCATCATGAGGTGTTGATGACCGATCCGACGGTGTGGGTGACATCGACGATCCACGAAACGCATCGGCGCAGCCCGGTGCCGGTCGCCATGTTCGCTGCTACCGGCTGGTTCCGCAGCAGCGCCATGTCCGGCCTCGACGATCGCACCGAGCCTTACCGCATCGCTTATGTCAGCGACAATCACACCGGTCTCGCGGCGGCGGCGACATCGGGCCTGGCGATCGCGCCGCTGTCGCGCAGCGGTATTCCGGAGGCGTGCCGGGAACTGACCGTGGCCGACGGCTATCCGATCATCGATTTTTCCAACGTCGTGCTGCTGGTCGGCGCCCGCGGCAGTGACGGGGTCGTCGACGGCATGGCCAACGCCATCCGCGACGCCTTCCGGCTGGCGGCGCCGCGGACGTCATAA
PROTEIN sequence
Length: 289
MRLESDMLRTFVAVAETGNFTRAADLSGRTQSAVSIQIKKLEETIGDLLFERGSRGVTLTAKGRQLLGYARRVMALLDEAAASLKAPRLHGVVRIGIPEEYGHSILPKVLGRFDMMHPDVEVTVQYGSSRANAAALAKGELDIAVVFEQASNTHHEVLMTDPTVWVTSTIHETHRRSPVPVAMFAATGWFRSSAMSGLDDRTEPYRIAYVSDNHTGLAAAATSGLAIAPLSRSGIPEACRELTVADGYPIIDFSNVVLLVGARGSDGVVDGMANAIRDAFRLAAPRTS*