ggKbase home page

SCNpilot_expt_1000_bf_scaffold_9476_curated_1

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: comp(2..610)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Rhizobium meliloti RepID=UPI000380DB89 similarity UNIREF
DB: UNIREF100
  • Identity: 52.7
  • Coverage: 182.0
  • Bit_score: 211
  • Evalue 7.40e-52
Spermidine/putrescine-binding periplasmic protein {ECO:0000313|EMBL:CDX35477.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.7
  • Coverage: 201.0
  • Bit_score: 232
  • Evalue 5.70e-58
extracellular solute-binding protein family 1 similarity KEGG
DB: KEGG
  • Identity: 45.3
  • Coverage: 201.0
  • Bit_score: 162
  • Evalue 1.20e-37

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Mesorhizobium plurifarium → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 609
ATGCGTAATATCCTTGCACTTACAGCGATGGCCACGCTTCTTGCGGGTACGACCGTCAATGCCGCCGATACAACCCTGACGATTTCGAGCTATGGGGGCGTCTACCAGGAAGCCCAGTCGAAATCCTACTTCCAGCCGTTCATGGCGCAGAATCCGGATATCAAGATCGTCGAGGACAGCTCGTCGAGCAATGCCAAGCTGAAGGCCATGGTGGAAACCGGCAATGTCACGCTGGACCTGCTGCTGACCGATGACAGCTTCGGCCTCGACGCCGACGCGCAGTGGCTGGAGCCGATCGACTATTCTGTCGTCGACAAGTCGAAATTCATCGACGGCGCGGCAGGCACCTACCGCGTGGCTTCGGACATCGAGGGCACCGTGCTGGCCTACAATGCCGAGGAATTTGGCGCCGAGGCGCCGAAGGGTTTTGCCGACTTCTTCAACACCGAAAAGTTTCCCGGCTCGCGTGCCGTCTGGAAGTATGCCGCCTCCGGTATCTTCGAGGTGGCTCTGATTGCCGACGGCGTGAAGCCGGAAGAGCTTTACCCGATCGACGTGGAGCGTGCGCTCAAGAAGCTCGATACGATCAAGGACGATCTCGTCTGGTGG
PROTEIN sequence
Length: 203
MRNILALTAMATLLAGTTVNAADTTLTISSYGGVYQEAQSKSYFQPFMAQNPDIKIVEDSSSSNAKLKAMVETGNVTLDLLLTDDSFGLDADAQWLEPIDYSVVDKSKFIDGAAGTYRVASDIEGTVLAYNAEEFGAEAPKGFADFFNTEKFPGSRAVWKYAASGIFEVALIADGVKPEELYPIDVERALKKLDTIKDDLVWW