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SCNpilot_expt_1000_bf_scaffold_9476_curated_3

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: comp(1037..1885)

Top 3 Functional Annotations

Value Algorithm Source
IclR family transcriptional regulator n=1 Tax=Pseudomonas putida CSV86 RepID=L1M150_PSEPU similarity UNIREF
DB: UNIREF100
  • Identity: 58.2
  • Coverage: 263.0
  • Bit_score: 317
  • Evalue 1.00e-83
IclR family transcriptional regulator {ECO:0000313|EMBL:EKX84659.1}; TaxID=1005395 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putida CSV86.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.2
  • Coverage: 263.0
  • Bit_score: 317
  • Evalue 1.40e-83
transcriptional regulator family protein 29 similarity KEGG
DB: KEGG
  • Identity: 50.0
  • Coverage: 252.0
  • Bit_score: 247
  • Evalue 6.90e-63

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Taxonomy

Pseudomonas putida → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 849
ATGACTGCACGTCCCTCCAACCTGACGCGATTGGCCACAATGACCGCAGCTGAAGATTCCCCTCTCTATGTCACCGCTCTTGCCAAGGGCCTTTCAGTCCTGACAGCGTTCGGCCCGTCCAGGCCGGCCATGAACCTGTTGGAGCTGGCGGATGCCACCGGCCTCAACAAAAGCACCATCCAGCGTTCCGTGTTCACGCTCGAAGCCATGGGTTACCTGGCGCGCGACGGCGGCTCCAAGCGATATCGGCTGACGGTGAAATCCCTGGAAATGGGAACCGGCTATCTCCAGACCGCAGAACTGGTCGAGCGAGCCAATCCCTTCATCCAGCAATTGAACCGCCAGACGGGCGAGAGCTGCAACCTGCTCGAGCCGTGGGAAACGGACATGGTGTATGTGGCCCGGTTCACGAGCCATAAGGAAATGCCGATTCACGTTCCGATCGGTCAACGCCTGCCGATGTACTGCACGGCGGCGGGCCGCGCCTATCTTTCGGCCCTGCCGAAGGAGCTGGCGGCTGTCTATATCGAGCGGTCCAACCGGGCGGCGTTCACGGCGCATACCGTGACGGAGCCCGCCATGTTGATGGAACTGCTGCAGCGTGCCCGCACCGACGGCTTTTCTCTCATCACCGAGGAAATCTACGTCGGCGACATCGCGATCGGCGCCTGCATCGTCAATGCCGAGGGGCAGCCGCTCGCGGCGATCAATATTTCCGTGCCGTTCAGCCGCTGGCGGCCGGAGCAGGTCCTCTCGGACCTCGCTCCGCAGCTGGTCAACACCGCGCGGGCAATTTCGAGCGCCGCAAAAGGGCTGAGGCCCTCCGGCGCAATCAAGCACCAAACCTAG
PROTEIN sequence
Length: 283
MTARPSNLTRLATMTAAEDSPLYVTALAKGLSVLTAFGPSRPAMNLLELADATGLNKSTIQRSVFTLEAMGYLARDGGSKRYRLTVKSLEMGTGYLQTAELVERANPFIQQLNRQTGESCNLLEPWETDMVYVARFTSHKEMPIHVPIGQRLPMYCTAAGRAYLSALPKELAAVYIERSNRAAFTAHTVTEPAMLMELLQRARTDGFSLITEEIYVGDIAIGACIVNAEGQPLAAINISVPFSRWRPEQVLSDLAPQLVNTARAISSAAKGLRPSGAIKHQT*