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SCNpilot_expt_1000_bf_scaffold_9476_curated_5

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: comp(3963..4151)

Top 3 Functional Annotations

Value Algorithm Source
Putative transcriptional regulator n=1 Tax=Rhizobium sp. CF080 RepID=J3BSY4_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 83.9
  • Coverage: 62.0
  • Bit_score: 106
  • Evalue 1.00e-20
Strain MEJ076 contig_2, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ05497.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.4
  • Coverage: 62.0
  • Bit_score: 126
  • Evalue 1.80e-26
BadM/Rrf2 family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 77.4
  • Coverage: 62.0
  • Bit_score: 103
  • Evalue 2.80e-20

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Taxonomy

Agrobacterium tumefaciens → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 189
ATGAGGCAGGATAGTCGACTTTCGCGCATGCTCCACGTCCTGATCCACATGGGGCGGCATGATGGGGCGATGACGTCGGAGATGATTGCGCAAATGCTCGACGCCAACCCTGTCGTGATCCGGCGCACCATGGCGGGACTGCGCGACGAGGGCTATGTCAATTCGGTGAAAGGGCATGGTGGAGGCTAG
PROTEIN sequence
Length: 63
MRQDSRLSRMLHVLIHMGRHDGAMTSEMIAQMLDANPVVIRRTMAGLRDEGYVNSVKGHGGG*