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SCNpilot_expt_1000_bf_scaffold_15348_curated_5

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: 1855..2616

Top 3 Functional Annotations

Value Algorithm Source
Beta-ketoadipate pathway transcriptional regulators, PcaR/PcaU/PobR family n=1 Tax=Sinorhizobium medicae (strain WSM419) RepID=A6UJN9_SINMW similarity UNIREF
DB: UNIREF100
  • Identity: 73.5
  • Coverage: 253.0
  • Bit_score: 368
  • Evalue 5.90e-99
beta-ketoadipate pathway transcription regulator; K02624 IclR family transcriptional regulator, pca regulon regulatory protein similarity KEGG
DB: KEGG
  • Identity: 73.5
  • Coverage: 253.0
  • Bit_score: 368
  • Evalue 1.90e-99
Beta-ketoadipate pathway transcriptional regulators, PcaR/PcaU/PobR family {ECO:0000313|EMBL:ABR63869.1}; TaxID=366394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium medicae (strain WSM419) (Ensifer medicae).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.5
  • Coverage: 253.0
  • Bit_score: 368
  • Evalue 8.30e-99

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Taxonomy

Sinorhizobium medicae → Sinorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 762
ATGGCAGTCAAGGAAAGGGACATGATGGGCAGCCTTGCCAAGGGCCTGAAGGTCGTCGAAGCCTTCACGGCGGAGAACCCGCGGCTCAGTATTGCGCAGGCTGCCGAAATCGCCGGCCTCGACCGCGCCACCACGCGCCGATGCCTGCTGACGCTGGCGGAACTCGGCTACTGCGCCTATGACGGCAAGTTCTTCACTGTGACACCAAGGGTTCTCCGGCTCGGCACAGGCTGCCTTGCGACCATGCCGCTGCCCCGGATCGTGCAGCCGTTCCTCGACGTGCTGTCGGAGCAGATCGGCCAGAGCACCTCGGTTTCCATCCTCGACGAAACCGAGATCGTCTACATCGCCCGGGCAGCGCAACGGCGTGTGATGTCGATTGCGCTGATGCCCGGTTCGCGCCTGCCGGCCTATTGCACCTCCATGGGGCGCGTTTTGCTCGCCGCCGCCGGCGAGGAGACGACACTGCGGCTGCTCACGGCCTCTCCGCTCGTGGCCCGGACGGAGTACACGGTCACCGATATCGATACGCTGATGGCGGAGATCGCCAAGGTGAAGGAGCGCGGTTTCGCCGCGATCAATCAGGAGGTCGAGATGGGGTTGTGCTCGATCGCCGTTCCGCTGAAGGCAGCCAACGGCAGGACGGTGGCCGCGCTCAATGTCGGGCTGGCGGCGGGCAAGGCAAGCATGGAGGATATTGAGCAGATGTTCCTGCCGCCTCTGCTGCGCATGCAGGCGGAGCTGCGGCAATCGCTCATCTGA
PROTEIN sequence
Length: 254
MAVKERDMMGSLAKGLKVVEAFTAENPRLSIAQAAEIAGLDRATTRRCLLTLAELGYCAYDGKFFTVTPRVLRLGTGCLATMPLPRIVQPFLDVLSEQIGQSTSVSILDETEIVYIARAAQRRVMSIALMPGSRLPAYCTSMGRVLLAAAGEETTLRLLTASPLVARTEYTVTDIDTLMAEIAKVKERGFAAINQEVEMGLCSIAVPLKAANGRTVAALNVGLAAGKASMEDIEQMFLPPLLRMQAELRQSLI*