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SCNpilot_expt_1000_bf_scaffold_15348_curated_6

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: comp(2661..3587)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator with cupin sensor, AraC family n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4F8Y8_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 85.4
  • Coverage: 301.0
  • Bit_score: 527
  • Evalue 1.20e-146
Transcriptional regulator with cupin sensor, AraC family {ECO:0000313|EMBL:EHS50753.1}; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. PDO1-076.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.4
  • Coverage: 301.0
  • Bit_score: 527
  • Evalue 1.70e-146
AraC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 68.9
  • Coverage: 302.0
  • Bit_score: 430
  • Evalue 6.30e-118

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Taxonomy

Rhizobium sp. PDO1-076 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 927
ATGGTCGCGCCACTTCTCGTTTCGCAAGACGAATCCGTTCCCGTTCACCCGGATCAGAATCCGCGGCACCCGCTGGTGATCTTCGGCGATCACCGGTTTTGCGCCGGCGAGGCGCTGCTGGTCCAGCGCATGCCCGGCCCGCACATGCACAGCCAGATCGAGCTGAATTTCGTGCTGGAAGGCGACATGACCTATTGGTTCGACGGCCGCGAACTGACGGTCGGCAAGGGCCGCCTCTGCCTCTTCTGGGGGATGATCCCGCACCAGGTGATCGACCGGGCGGAAGGAACCCGTTTCGTCTGCCTCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGATGCGGTGTTTCGCGGCGCGATGATCGAGGCGACGGAGCTTCGCCCCTACGACCACGACATCTTTTTGCGATGGCGCGAGGAATTGCTGGCCGGTGACGAAGGATTGACGGAAATCGTTCGCAACGAACTGACGGCGCGGGTTCTGCGCATAGAACGCGACGGCTGGCGTGATCTGCGCGAGGAAGGCTCGGCCATTGCCAGTCTTGACCATCATGACGGTGAACGCATCGAAAATGTCGAGCGCATGCTGCGCTTCATCGCGGAAAACGCCCTCGATGACATTTCCGCCGACGATGTCGGGCGCGATGCCGGCTTGCACCCGAATTATGCCATGACGCTGTTCAAGCGCGCCGTCGGGCTGACCATCAATCAGGCGATCGTCCGCCATCGCCTCGACACGGCACAATCGCTGCTGATCGCCACGGATCTGTCGATCACGGACGTGGCTTTCGAGTCCGGCTTCGGCTCCGCCTCGCGTTTCTACGAAGCGTTCAGCGAACGGTTCAACGAAAAACCGACCGCCTTCCGCAAGCGCATGCGCTCGAAAGGCGGCGCGCCCAGCGGGCGGTCACGGCAATGA
PROTEIN sequence
Length: 309
MVAPLLVSQDESVPVHPDQNPRHPLVIFGDHRFCAGEALLVQRMPGPHMHSQIELNFVLEGDMTYWFDGRELTVGKGRLCLFWGMIPHQVIDRAEGTRFVCLXXXXXXXXXXXXXDAVFRGAMIEATELRPYDHDIFLRWREELLAGDEGLTEIVRNELTARVLRIERDGWRDLREEGSAIASLDHHDGERIENVERMLRFIAENALDDISADDVGRDAGLHPNYAMTLFKRAVGLTINQAIVRHRLDTAQSLLIATDLSITDVAFESGFGSASRFYEAFSERFNEKPTAFRKRMRSKGGAPSGRSRQ*