ggKbase home page

SCNpilot_expt_1000_bf_scaffold_1415_curated_18

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: 20579..21640

Top 3 Functional Annotations

Value Algorithm Source
Phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; EC=2.5.1.54 {ECO:0000256|PIRNR:PIRNR001361};; 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase {ECO:0000256|PIRNR:PIRNR001361}; DAHP synthase {ECO:0000256|PIRNR:PIRNR001361}; Phospho-2-keto-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.9
  • Coverage: 349.0
  • Bit_score: 562
  • Evalue 5.40e-157
Phospho-2-dehydro-3-deoxyheptonate aldolase n=1 Tax=Rhizobium freirei PRF 81 RepID=N6V531_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 77.9
  • Coverage: 349.0
  • Bit_score: 562
  • Evalue 3.90e-157
3-deoxy-7-phosphoheptulonate synthase similarity KEGG
DB: KEGG
  • Identity: 76.9
  • Coverage: 351.0
  • Bit_score: 554
  • Evalue 1.90e-155

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhizobium freirei → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1062
ATGCCGCATACCACAGACGACCTGCGTATCGTCGACATCACCCCGCTGAGCTCGCCGGAGCGCATCCTGACGGAGATCCCGCGCACCGATGCGGTGACCGAGACCGTCACCCGCTCGCGCCAGACGGTGCACGACATCCTGCACGACAAGGACGACCGGCTGATCGTCGTCATCGGCCCCTGCTCGATCCACGATCCGGTCGCCGCCCGCGACTATGCCGGCCTGCTGGAGGAGCAGCGCCGCCGCTTCTCCGACGAACTGGAAGTGGTAATGCGCGTCTATTTCGAAAAGCCGCGCACGACGGTGGGCTGGAAAGGCCTGATCAACGATCCGCATCTCGACGGCAGCTACCGCATTGAGGACGGCCTGCGGCTTGCCCGCGGCCTGATGATCGACGTCAACAAGCTCGGCCTGCCCGCCGGCTCGGAATTCCTCGACACGATCACGCCGCAATACATCGCCGACCTGGTCAGCTGGGGCGCCATCGGCGCGCGCACGACCGAAAGCCAGGTACACCGCGAACTGGCCTCCGGCCTGTCCTGCCCGGTGGGTTTCAAGAACGGCACGGACGGCAACGTCCGCATCGCGCTCGACGCCTGCATGGCCTCGTCGCGGCCACATCATTTCCCGGCGGTGACCAAGGACGGTCGCGCCGCGATCGCCTCGACCCGCGGCAACGAGGACTGCCACGTCATCCTGCGCGGCGGCAGCCAGACGAACTACGATGCCGACAGTGTCAACGCCGTCTCGGCGCTCTCGGAGAAGGTCGGGCTTGCGCCGCGGCTGATCATCGACGCCAGCCATGCCAACAGCAGCAAGAACCCGGAAAACCAGCCGAAGGTGACCGCCGACGTCGGCCGCCAGGTGGCGGCGGGCGACCGGCGCATCAAGGGCGTCATGGTGGAAAGCCACCTCGTCGCCGGGCGGCAGGACCTGGTGCCGGGCAAGCCCCTCGTCTACGGCCAGAGCATCACCGACGGCTGCATCGACTGGGCGACCTCGGTTTCTGTACTGGAAGATCTGGCGCGCTCGGTCCAGGCACGCCGGCGGGCTGCGGCATAA
PROTEIN sequence
Length: 354
MPHTTDDLRIVDITPLSSPERILTEIPRTDAVTETVTRSRQTVHDILHDKDDRLIVVIGPCSIHDPVAARDYAGLLEEQRRRFSDELEVVMRVYFEKPRTTVGWKGLINDPHLDGSYRIEDGLRLARGLMIDVNKLGLPAGSEFLDTITPQYIADLVSWGAIGARTTESQVHRELASGLSCPVGFKNGTDGNVRIALDACMASSRPHHFPAVTKDGRAAIASTRGNEDCHVILRGGSQTNYDADSVNAVSALSEKVGLAPRLIIDASHANSSKNPENQPKVTADVGRQVAAGDRRIKGVMVESHLVAGRQDLVPGKPLVYGQSITDGCIDWATSVSVLEDLARSVQARRRAAA*