ggKbase home page

SCNpilot_expt_1000_bf_scaffold_1415_curated_19

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: comp(21773..22330)

Top 3 Functional Annotations

Value Algorithm Source
transposase ISRSO1 n=1 Tax=Methylocystis parvus RepID=UPI000366D5AF similarity UNIREF
DB: UNIREF100
  • Identity: 73.8
  • Coverage: 187.0
  • Bit_score: 282
  • Evalue 2.40e-73
Isrso1-transposase similarity KEGG
DB: KEGG
  • Identity: 71.7
  • Coverage: 187.0
  • Bit_score: 275
  • Evalue 9.20e-72
Isrso1-transposase protein {ECO:0000313|EMBL:ADZ68929.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.7
  • Coverage: 187.0
  • Bit_score: 275
  • Evalue 4.10e-71

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Polymorphum gilvum → Polymorphum → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 558
GTGCGTCGATTGCTGTTCCGGACGATCCATGACGTCGCACTGATGATCGACCGCGAACGGGAGGGACGCGACCAGCAACCCAGCGCCGGCATCATCGACAGTCAGTCGGTCAAGGCTCCGGCGGCTGGCGGCAGCCGCGGCTTCGACGGGGCCAAGAAGATCGTTGGCCGCAAACGCCACATCGCCGTCGACACCAGCGGTCGCTTGCTGTTGGTCAACCTGACGACGGCCGATATCTCCGACAGCGCCGGCGCGAAGGCCATTGTCGATGCGGTCCAAAAACGCTGGCCCTGTGTCAGGCATCTGTTTGCCGACGGTGCTTATGATCGCCGTCAACTGCTGGATAAGGCGGAGTTCCTGGGCTTTACGGTCGAAATCGTCAGGCGCATCGACGAAGGCTTCAAAATCCTGCCAAAGCGATGGGTGGTCGAACGCACCTTCGGATGGCTCACCCGCTATCGCCGCCTCGTGCGCGATTATGAAGCACGCATCGATGTCTCCGAAGCCATGATATATGCCGCAATGAGCAGTTTAATCATCAGACGGATAACTCACTGA
PROTEIN sequence
Length: 186
VRRLLFRTIHDVALMIDREREGRDQQPSAGIIDSQSVKAPAAGGSRGFDGAKKIVGRKRHIAVDTSGRLLLVNLTTADISDSAGAKAIVDAVQKRWPCVRHLFADGAYDRRQLLDKAEFLGFTVEIVRRIDEGFKILPKRWVVERTFGWLTRYRRLVRDYEARIDVSEAMIYAAMSSLIIRRITH*