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SCNpilot_expt_1000_bf_scaffold_1867_curated_9

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: 6830..7948

Top 3 Functional Annotations

Value Algorithm Source
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.8
  • Coverage: 372.0
  • Bit_score: 661
  • Evalue 5.30e-187
dnaN; DNA polymerase III subunit beta; K02338 DNA polymerase III subunit beta [EC:2.7.7.7] similarity KEGG
DB: KEGG
  • Identity: 89.5
  • Coverage: 372.0
  • Bit_score: 660
  • Evalue 3.50e-187
DNA polymerase III subunit beta n=1 Tax=Rhizobium grahamii CCGE 502 RepID=S3HPV8_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 90.1
  • Coverage: 372.0
  • Bit_score: 661
  • Evalue 4.90e-187

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Taxonomy

Agrobacterium tumefaciens → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1119
ATGCGTATTACTCTTGAGCGGTCCAATCTCCTGAAATCGCTGAACCACGTCCACCGCGTGGTCGAACGGCGCAACACGATCCCGATCCTGTCGAACGTGCTGCTGCGCGCCGATGGCATCGCACTTGCGATGAAGGCCACCGACCTCGACCTCGAAATTACAGAAGAGACCCCCGCCAATGTCGAACAGGCGGGCGCCACCACCGTGCCGGCGCACCTGCTCTACGACATCGTCCGCAAGCTGCCAGACGGCGCCGAAGTGTTCCTCGCCACCACCCCTGATGGCGGCACGATGACCATCGCGTCGGGCCGCTCGAAATTTTCGCTGCAATGCCTGCCGGAAGCCGATTTCCCGGATCTCACCGCCGGCACCTTCAGCCACACCTTCAAGCTGACCGCTTCCGACCTGAAGATGCTGATCGACCGGACGCAGTTCGCGATCTCGACGGAAGAGACGCGTTACTACCTGAACGGCATCTTCTTCCACACCATCGAGGCGCAGGGCGACCTGAAGCTGCGCGCCGTCGCCACCGACGGCCACCGCCTGGCCCGCGCCGACATCAAGGCGCCGTCCGGCTCGGAAGGCATGCCGGGCATCATCATTCCGCGCAAGACGGTCGGCGAGTTGCAGAAGCTGGTCGACAATCCGGAGGCGACCGTCACCATCGAAGTCTCGGATGCCAAGATCCGCCTGTCGATCGGCTCGATCGTCATGACCTCGAAGCTGATCGACGGCACCTTCCCCGATTACCAGCGCGTCATCCCGACCGGCAACGACAAGGAAATGCGCGTCGATTGCCAGACCTTCGCCCAGGCCGTCGACCGCGTCTCGACCATCTCGTCCGAGCGTGGCCGCGCCGTGAAGCTGGCGCTCACCGACGGGCAGCTGCTGCTCACGGTCAACAACCCCGATTCCGGCAGCGCCACCGACGAACTCGCCGTCTCCTACGAGAGCGACGCGATGGAAATCGGCTTCAACGCCAAGTACCTGCTCGACATCACCGCGCAGCTTTCCGGCACGGACGCCGTCTTCCTGCTCGCCGATGCCGGTTCGCCGACGCTGATCCGCGACACGGCCGGCGACGATGCCCTCTATGTCCTGATGCCGATGCGCGTGTAG
PROTEIN sequence
Length: 373
MRITLERSNLLKSLNHVHRVVERRNTIPILSNVLLRADGIALAMKATDLDLEITEETPANVEQAGATTVPAHLLYDIVRKLPDGAEVFLATTPDGGTMTIASGRSKFSLQCLPEADFPDLTAGTFSHTFKLTASDLKMLIDRTQFAISTEETRYYLNGIFFHTIEAQGDLKLRAVATDGHRLARADIKAPSGSEGMPGIIIPRKTVGELQKLVDNPEATVTIEVSDAKIRLSIGSIVMTSKLIDGTFPDYQRVIPTGNDKEMRVDCQTFAQAVDRVSTISSERGRAVKLALTDGQLLLTVNNPDSGSATDELAVSYESDAMEIGFNAKYLLDITAQLSGTDAVFLLADAGSPTLIRDTAGDDALYVLMPMRV*