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SCNpilot_expt_1000_bf_scaffold_1867_curated_13

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: 10275..10967

Top 3 Functional Annotations

Value Algorithm Source
pyrF; orotidine 5'-phosphate decarboxylase; K01591 orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] similarity KEGG
DB: KEGG
  • Identity: 86.1
  • Coverage: 230.0
  • Bit_score: 390
  • Evalue 4.10e-106
Orotidine 5'-phosphate decarboxylase {ECO:0000256|HAMAP-Rule:MF_01200, ECO:0000256|RuleBase:RU000512}; EC=4.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01200, ECO:0000256|RuleBase:RU000512};; OMP decarboxylase {ECO:0000256|HAMAP-Rule:MF_01200}; TaxID=359 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium rhizogenes.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.1
  • Coverage: 230.0
  • Bit_score: 390
  • Evalue 1.80e-105
Orotidine 5'-phosphate decarboxylase n=2 Tax=Rhizobium/Agrobacterium group RepID=PYRF_AGRRK similarity UNIREF
DB: UNIREF100
  • Identity: 86.1
  • Coverage: 230.0
  • Bit_score: 390
  • Evalue 1.30e-105
  • rbh

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Taxonomy

Agrobacterium rhizogenes → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 693
ATGATCGCGCGTGACCGTTTGATCGTCGGCCTCGACGTGCCCACCGTTCAGGAAGCCGAACGGCTGGTGGCGACGCTCGGCGACGATATCCTCTTCTACAAGATCGGCTATCAGCTCGCTTTCGCCGGCGGGCTCGAATTCGCCCGCGACATCGCCCGGGACGGCAAGAAGGTCTTCCTCGACATGAAACTGCTCGATATCGACAACACCGTCGCGTCGGGTGTCGAGAACATCGCCAAGATGGGCATGTCGATGCTGACATTGCACGCCTATCCCAAGGCGATGCGCGCCGCCGTCCAGGCCGCCAGGGGCTCCGGCCTGTGTCTGCTCGGCGTCACTGTTCTGACCTCGATGGACGAGCAGGACCTGACGGATGCCGGCTACGAATACGATCCGCACACGCTGGTTTTGCGCCGCGCCGAACAGGCGCGCCAGGCCGGCATGGGCGGCATCGTCTGCTCGGCGGAAGAAGCGAAGGCGGTGCGCGCCGTGATCGGCCCGGACATGGCCCTGGTGACGCCCGGCATCCGCCCCGCAGGCACTGAGAAGGGCGACCAGAAGCGGGTGATGACGCCGGCCGATGCGATCCGCGCCGGTTCGAGCCATCTCGTCGTTGCCCGGCCGATCGTCAAGGCTGCCGATCCGCTTGGCGCCGCCCGCGCCATCCTCGCCGAGATGACGGCAGCAGTCTAA
PROTEIN sequence
Length: 231
MIARDRLIVGLDVPTVQEAERLVATLGDDILFYKIGYQLAFAGGLEFARDIARDGKKVFLDMKLLDIDNTVASGVENIAKMGMSMLTLHAYPKAMRAAVQAARGSGLCLLGVTVLTSMDEQDLTDAGYEYDPHTLVLRRAEQARQAGMGGIVCSAEEAKAVRAVIGPDMALVTPGIRPAGTEKGDQKRVMTPADAIRAGSSHLVVARPIVKAADPLGAARAILAEMTAAV*