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SCNpilot_expt_1000_bf_scaffold_2461_curated_20

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: 14367..14771

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L20 n=1 Tax=Sinorhizobium medicae (strain WSM419) RepID=RL20_SINMW similarity UNIREF
DB: UNIREF100
  • Identity: 91.0
  • Coverage: 134.0
  • Bit_score: 243
  • Evalue 8.90e-62
rplT; 50S ribosomal protein L20; K02887 large subunit ribosomal protein L20 similarity KEGG
DB: KEGG
  • Identity: 91.0
  • Coverage: 134.0
  • Bit_score: 243
  • Evalue 2.80e-62
50S ribosomal protein L20 {ECO:0000255|HAMAP-Rule:MF_00382}; TaxID=366394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium medicae (strain WSM419) (Ensifer medicae).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.0
  • Coverage: 134.0
  • Bit_score: 243
  • Evalue 1.20e-61

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Taxonomy

Sinorhizobium medicae → Sinorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 405
ATGGCACGCGTAAAACGTGGCGTAACGGCTCACGCCAAGCATAAAAAAGTCCTCAAGGCCGCCAAGGGTTTCTACGGCCGTCGCAAGAACACCATCCGCGCTGCAAAGGCTGCGGTTGACCGTTCCAAGCAGTTTGCAACGCGCGACCGTCGCGCCAAGAAGCGCAACTTCCGCGCCCTGTGGATCCAGCGTATCAACGCTGCCGTCCGCGATTTCGGCCTCACCTACGGCCGCTTCATCGACGGCCTGAACAAGGCTGGCATCGAAGTCGACCGCAAGGTCCTGTCCGACATGGCCATCCATGAGCCGGCTGCTTTCGGCGCGCTCGTCGAAGCCGCCAAGAAGGCGCTCGCCTACCTCAAGGACACGGGCACCCCGAACGAGTTTGAAGGCGCGGTCAAGTAA
PROTEIN sequence
Length: 135
MARVKRGVTAHAKHKKVLKAAKGFYGRRKNTIRAAKAAVDRSKQFATRDRRAKKRNFRALWIQRINAAVRDFGLTYGRFIDGLNKAGIEVDRKVLSDMAIHEPAAFGALVEAAKKALAYLKDTGTPNEFEGAVK*