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SCNpilot_expt_1000_bf_scaffold_9680_curated_4

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: comp(2096..3628)

Top 3 Functional Annotations

Value Algorithm Source
Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Rhizobium sp. CF142 RepID=J2KY38_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 43.2
  • Coverage: 512.0
  • Bit_score: 407
  • Evalue 1.80e-110
Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:EJJ25684.1}; Flags: Precursor;; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 43.2
  • Coverage: 512.0
  • Bit_score: 407
  • Evalue 2.50e-110
diguanylate cyclase similarity KEGG
DB: KEGG
  • Identity: 43.7
  • Coverage: 513.0
  • Bit_score: 400
  • Evalue 8.80e-109

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Taxonomy

Rhizobium sp. CF142 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1533
ATGCTCATCGGTTCCGTCGCCGTGGTGCGCACCTCCTATCTGGAATATCTGGCGCTCGACGAGGACAAGCATTACGCCGACCTCCTGTCGCAGGCCGGCTCCATCGCCGCGTCGGCCCTGCCGCAGGAGGCCCGTACGACGATCGCCTATCTGGCCGACGATAGCCCTCGAACCACGTCGGCGATGCATGAGGCGCGCATGGCGATGGACCAGGCGCGCCAGGATTTCTATTTTGCCGTGTCCGACGCGGTGATCGTCGATGACAGGCTCGAGCAACTGCTGGAGAGCTGGAAGGAAACCCACCAGAACATTCTTGCTTTCCGGGCGAAGGTCGATGCCGGCGAGGCGTCGGTGCGGCAAATCATCGGGGCTTATCGTCCTTTGGCCCTTGTCCAGCTCGAAATGGTGGATTTCCTGGGGACGCGGATCACGGACAGGACGCTGCTGCATAAGTCGGTCGAGTTCTTCAACATCCTGACGACCCATCAGGGTGGGCTGGTGACGAACTTCCTCGTTCGCCGCAGCCTGGCCGAAAACGGTCTCGACGTCGCCGACCGTGATGCCCTGGCGACAGCCCAGGCCCTGCATCGCGCCGGCATCAGCCAGTTGCGATATCACACCGACACGCCGGTCATCAACGATATCATGGCCTTCGAGCAGTCGGAGACCGGAAAGAAGATCGAGCGATTCGCGCAGGCCGTACTCGCGAACGTCCTGCCTTTGGCTGGTGGTTCGGTCAACGAATGGGATAAGCTCCAGAAGGTGCGCTTCGATTTCTGGCGGGCGAAGATCGGTGAAGAAATCGCCGACATCCGCAAGTCCGGCGACGACCTGGCGGCGCGTGCCCGTCTCCACCTGATGCTGGTGCTCGGCATATCGGTGACGCTGCTGGTGCTCGTGGCAGTCGTCATCATCCTTGCAGCGCGCGGCGTCAACCTGGTCGGCAAGCTGACCCGGGAACGTGAAATCCTGATCAACGAGTTGCGCAGTGCCGCCCAGACCGATCTTTTGACGGGACTCTACAATCGCCGCGGTTTCGAACAGGCTGCCGTGACGATCCTCAGCCAGGCGGTCGGCCTGCGCTGGGTCTCGATCGTCCTGTTCGATCTCGACCATTTCAAGCAGGTCAACGATGCGCATGGCCACGATGCCGGCGATGTGGTCCTGAAAGAGATCGCCCTCGTCGCACGGCGGAATTTCCGCAATTTCGATCTGCTGGTGCGCCATGGCGGCGAGGAGTTCCTGGCACTTCTGCCCGATTGCACCATCGAAGAAGCGTCGCGGATTGCTGAAAAGGCCCGGATCGCCATCGAGGCGGCGGAGATCGCCCTGCCCAATGGCGAAAAGCTGAAGATAAGCGCCAGCTTCGGATGTGCCGGACGCGAGGAAAAATCCGGCCGCCATGTTCTCGAACCGCTGATCAAGCGGGCGGATCTGGCTCTTTATGCCGCCAAGCATTCCGGCCGCAACCGGGTGGTGGCGGATGCCTTCATCCCCGACAATCAGGACCGGTCGCGCAAGCGAATGGCGTGA
PROTEIN sequence
Length: 511
MLIGSVAVVRTSYLEYLALDEDKHYADLLSQAGSIAASALPQEARTTIAYLADDSPRTTSAMHEARMAMDQARQDFYFAVSDAVIVDDRLEQLLESWKETHQNILAFRAKVDAGEASVRQIIGAYRPLALVQLEMVDFLGTRITDRTLLHKSVEFFNILTTHQGGLVTNFLVRRSLAENGLDVADRDALATAQALHRAGISQLRYHTDTPVINDIMAFEQSETGKKIERFAQAVLANVLPLAGGSVNEWDKLQKVRFDFWRAKIGEEIADIRKSGDDLAARARLHLMLVLGISVTLLVLVAVVIILAARGVNLVGKLTREREILINELRSAAQTDLLTGLYNRRGFEQAAVTILSQAVGLRWVSIVLFDLDHFKQVNDAHGHDAGDVVLKEIALVARRNFRNFDLLVRHGGEEFLALLPDCTIEEASRIAEKARIAIEAAEIALPNGEKLKISASFGCAGREEKSGRHVLEPLIKRADLALYAAKHSGRNRVVADAFIPDNQDRSRKRMA*