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SCNpilot_expt_1000_bf_scaffold_3652_curated_20

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: comp(23500..27192)

Top 3 Functional Annotations

Value Algorithm Source
L-proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase {ECO:0000313|EMBL:EYR78620.1}; EC=1.2.1.88 {ECO:0000313|EMBL:EYR78620.1};; EC=1.5.5.2 {ECO:0000313|EMBL:EYR78620.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.7
  • Coverage: 999.99
  • Bit_score: 2054
  • Evalue 0.0
putA; bifunctional PutA protein; K13821 proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.99.8 1.5.1.12] similarity KEGG
DB: KEGG
  • Identity: 77.7
  • Coverage: 999.99
  • Bit_score: 1889
  • Evalue 0.0
Bifunctional PutA protein n=1 Tax=Rhizobium fredii (strain HH103) RepID=G9AA08_RHIFH similarity UNIREF
DB: UNIREF100
  • Identity: 77.7
  • Coverage: 999.99
  • Bit_score: 1889
  • Evalue 0.0

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3693
ATGGAAATGGCTGAGCCCGCGATCAACAACGATAAAGACATCTTTGCCGCTTTCGCCCCGCCGGTCAGGGCGCAGAGCGAATTGCGGCAGGCAATCACCGCCGCCTATCGCCGGCCGGAACAGCAGGCCGTCAACGATCTTCTGCCGCAGGCCTCGCTGCCCGACGATATCGCCGCGCGCACCCGCGAGACGGCGCGAAACCTCATCGTGGCGCTGCGGGCGAAACACAAGGGCTCCGGCGTCGAGGGGCTGGTGCATGAATATTCGCTGTCCAGCCAGGAAGGCGTGGCGCTGATGTGCCTGGCGGAAGCGCTGCTGCGCATTCCGGACACGGCGACGCGCGACGCACTGATCCGCGACAAGATCGCCGACGGCAACTGGAAATCGCATATCGGCGAGGGCCGTTCGCTGTTCGTCAATGCGGCGACCTGGGGTCTCGTCGTCACCGGCAAGCTCACCTCGACCGTCAACGACCGCAGCCTTTCGGCAGCGCTGACGCGGCTGATCGCCCGCTGCGGTGAACCCGTCATCCGCCGCGGCGTCGACATGGCCATGCGCATGATGGGCGAGCAGTTCGTCACCGGCGAAACGATCGACGAAGCGCTGCGGCGTTCCCGCGCCATGGAGCAGAAAGGGTTCCGCTACTCCTACGACATGCTGGGGGAGGCCGCGACCACCGCCGCCGATGCCGAGCGTTATTTCAAGGATTACGAAACGGCGATCCACGCCATCGGCAAGGCATCGGCCGGGCGCGGCATCTATGAAGGACCGGGCATCTCCATCAAGCTTTCTGCCCTGCACCCGCGCTACGTGCGTGCGCAGGCCGAACGGGTGATGGGCGAATTGTTGCCGAAGGTGAAGGCGCTGGCGGCCATCGCCAGGTCCTACAATATCGGCCTGAACATCGACGCGGAAGAGGCGGACCGGCTGGAACTGTCGCTCGATCTTCTCGAAGAACTTTGCTTCGATCCGGCTCTCGCCAACTGGGATGGCATCGGCTTCGTGGTGCAGGCTTATGGAAAGCGTTGCCCGTTCGTGCTCGATTTCGTCATCGATCTCGCCCGGCGGTCGAGCCGGCGCATCATGGTCCGGCTGGTGAAGGGCGCCTATTGGGACGCGGAGATCAAGCGGGCGCAGCTCGACGGTCTGGAAGAATTCCCCGTCTTCACCCGCAAGGTGCACACCGATGTCTCCTACATCGCCTGCGCCAGGAAGCTGCTTGCGGCCGCCGATGCCGTCTTCCCGCAATTCGCCACCCACAATGCCCAGACGCTCGCCTCCATCTACCAGCTGGCAGGCCCGGATTTTCGCGTCGGCCAATACGAGTTCCAGTGCCTGCATGGCATGGGCGAGCCGCTTTACGAAGAAGTCGTCGGCCGCGAAAGGCTCGACCGTCCCTGCCGCATCTACGCGCCGGTCGGTACCCACGAGACGTTGCTTGCCTATCTCGTCCGGCGTCTGCTGGAAAACGGTGCGAACTCCTCCTTCGTCAACCGTATTGCCGATCCGCTGGTTTCGGTGGACGAACTCGTTGCCGATCCGGTGGCGGTGGTACGGGCCATGGCGTCTCCGGGCGCGAAACACGACCGTATCGCCCTTCCCCAGGATCTCTACGGCAAGGGCCGGCTGAATTCCGCCGGGCTCGACCTCTCGAACGAGACGGTGCTCTCGGTCCTCTCCACGGAACTGCGCGACAGTGCGAGGGTGGACTGGCAGGCCGAACCGATGCTGGCGGATGGTTCGAGCAAGGGTGACCGGCGTCCCGTGCGCAATCCCGCCGATCTCAGCGACGTGGTCGGATACGTCACCGAAATCGGCGTCGAGGACGTGGCGAAGGCTGCGCGTCCGGCACTTGAGGCGGCACCCGCATGGGCTGCCGTGTCGCCGCGTGAACGGGGCGACTGCCTGGACAAGGCGGCAGACCTGATGCAGGCACGCATACCGGCCCTGATCGGCCTGGCGATCCGCGAGGCCGGCAAATCGGCGGCGAACGCGATTGCCGAGGTGCGCGAAGCGATCGATTTCCTGCGTTATTACGCCGAGCAGGCCCGCCGCACGCTCGGTGCCGGCCACAAGCCGCTCGGACCTGTGGTCTGCATCAGCCCCTGGAATTTCCCGCTCGCCATCTTCACGGGGCAGATCGCGGCGGCCCTCGTCGCCGGCAATCCGGTGCTGGCCAAGCCGGCGGAAGAAACGCCGCTGATCGCCGCCGAGGCCATCCGCATACTTCGCGAGGCGGGTATCCCTGCCGGCGCCGTGCAGCTTGTGCCGGGAGACGGACGGGTAGGCGCAGCCCTGGTTGCGGCCGGTGAAACGGCGGCGGTGATGTTTACCGGCTCGACCGAGGTCGCCCGCCTGATCCAGGCGGAACTGTCGAACCGCCTGTCGGCGTCGGGAAAACCGATCCCGCTGATCGCCGAGACCGGCGGCCAGAACGCCATGATCGTCGATTCCTCGGCGCTGGCGGAGCAGGTGGTCGCCGATGTCATCGCTTCCGCCTTCGACAGTGCCGGCCAGCGTTGCTCCGCGCTGCGTGTCCTGTGCCTGCAGGAGGATATCGCCTATCGGACGCTGACCATGCTCAAGGGCGCCCTGGCCGAGCTTCGCATCGGCCGCACCGACAGGCTCAATGTCGATACCGGGCCGGTGATCACCGCCGAAGCCCGCGAGACCATCGAGGCGCACATCGAGAGAATGCGCTCGCTCGGCCGCAAGGTCGAACAGGTGGCGCTGCCGCCGGAAGCGCAGCGCGGCACCTTCGTCTCGCCAACGATCATCGAGCTGGAATCACTCTCCGATCTCAAGCGCGAGGTGTTTGGCCCGGTGCTGCACGTCGTGCGTTTCAAGCGCGACGACCTGGACCGGCTGATCGATGATATCAACGCGACGGGATACGGGCTGACCTTCGGCCTGCACACCCGCCTCGACGAAACCATCGCGCACGTCACCAGCCGGGCCAAGGCCGGCAACATCTATGTCAACCGCAACATCATCGGCGCGATCGTCGGCGTGCAGCCGTTCGGTGGCCGAGGTCTTTCCGGAACGGGGCCGAAGGCTGGCGGGCCGCTCTATATCGGCCGCCTCGTCCAGACGCCGCCGATCCCGCCGCAGCACAGCTCGACCTATATCCATCCCGGCGTGCTCGACCTGGCGGAATGGTTGCGCAAGCGCAACAACAACCAGCTCGCCGATCGCATTCGCGATCTCGGCGGCAACAGCGCGCTCGGCATGACCGTGGAACTTGCCGGCCCTGTCGGCGAACGCAACCTCTATGCACTTCACCCGCGCGGAAAAATCCTTCTGGTTCCTGCGACGGAGGACGGGTTGGTGGCGCAGCTTGGAGCGGTTTTCGCCACCGGCAATATTCCGGTGATCGACGCCGGTTCCGGCCTGCGGCCTTCGATGGCGGATCTGCCGGCCAGCCTGAAGGCGCTTCTGACCTGGTCGACCGACTGGTCCGCGAACGGCCCCTATGCGGGAGCGCTGATCGAGGGCGACGCGGAAACGGTTCTGGCCGCCACCCGCCGCATCGCCGGCCTGCCGGGACCACTGGTCCTCACCCAGGCCGCATCGACGGCAGAGATACGGGCCGGCGCCGAGGCCTATTGCCTCAACTGGCTGCTGGAAGAGGTATCGACCTCGATCAATACCGCCGCCGCCGGCGGCAATGCCAGCCTGATGAGCATCGGCTAG
PROTEIN sequence
Length: 1231
MEMAEPAINNDKDIFAAFAPPVRAQSELRQAITAAYRRPEQQAVNDLLPQASLPDDIAARTRETARNLIVALRAKHKGSGVEGLVHEYSLSSQEGVALMCLAEALLRIPDTATRDALIRDKIADGNWKSHIGEGRSLFVNAATWGLVVTGKLTSTVNDRSLSAALTRLIARCGEPVIRRGVDMAMRMMGEQFVTGETIDEALRRSRAMEQKGFRYSYDMLGEAATTAADAERYFKDYETAIHAIGKASAGRGIYEGPGISIKLSALHPRYVRAQAERVMGELLPKVKALAAIARSYNIGLNIDAEEADRLELSLDLLEELCFDPALANWDGIGFVVQAYGKRCPFVLDFVIDLARRSSRRIMVRLVKGAYWDAEIKRAQLDGLEEFPVFTRKVHTDVSYIACARKLLAAADAVFPQFATHNAQTLASIYQLAGPDFRVGQYEFQCLHGMGEPLYEEVVGRERLDRPCRIYAPVGTHETLLAYLVRRLLENGANSSFVNRIADPLVSVDELVADPVAVVRAMASPGAKHDRIALPQDLYGKGRLNSAGLDLSNETVLSVLSTELRDSARVDWQAEPMLADGSSKGDRRPVRNPADLSDVVGYVTEIGVEDVAKAARPALEAAPAWAAVSPRERGDCLDKAADLMQARIPALIGLAIREAGKSAANAIAEVREAIDFLRYYAEQARRTLGAGHKPLGPVVCISPWNFPLAIFTGQIAAALVAGNPVLAKPAEETPLIAAEAIRILREAGIPAGAVQLVPGDGRVGAALVAAGETAAVMFTGSTEVARLIQAELSNRLSASGKPIPLIAETGGQNAMIVDSSALAEQVVADVIASAFDSAGQRCSALRVLCLQEDIAYRTLTMLKGALAELRIGRTDRLNVDTGPVITAEARETIEAHIERMRSLGRKVEQVALPPEAQRGTFVSPTIIELESLSDLKREVFGPVLHVVRFKRDDLDRLIDDINATGYGLTFGLHTRLDETIAHVTSRAKAGNIYVNRNIIGAIVGVQPFGGRGLSGTGPKAGGPLYIGRLVQTPPIPPQHSSTYIHPGVLDLAEWLRKRNNNQLADRIRDLGGNSALGMTVELAGPVGERNLYALHPRGKILLVPATEDGLVAQLGAVFATGNIPVIDAGSGLRPSMADLPASLKALLTWSTDWSANGPYAGALIEGDAETVLAATRRIAGLPGPLVLTQAASTAEIRAGAEAYCLNWLLEEVSTSINTAAAGGNASLMSIG*