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SCNpilot_expt_1000_bf_scaffold_3652_curated_21

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: 27351..27824

Top 3 Functional Annotations

Value Algorithm Source
Proline dehydrogenase transcriptional activator PutR n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LWE3_RHITR similarity UNIREF
DB: UNIREF100
  • Identity: 75.2
  • Coverage: 149.0
  • Bit_score: 227
  • Evalue 1.30e-56
Transcriptional regulator {ECO:0000313|EMBL:EYR78619.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.5
  • Coverage: 157.0
  • Bit_score: 272
  • Evalue 2.90e-70
putR; proline dehydrogenase transcriptional activator PutR similarity KEGG
DB: KEGG
  • Identity: 75.2
  • Coverage: 149.0
  • Bit_score: 227
  • Evalue 4.10e-57

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 474
ATGTCCAAAATCAAACAGGAAAACAGCGAAATCGACACGATAGACAGGAAAATTCTCGATCTACTCGTTGAAAACGCTCGCATTTCCATCACAGAAATCTCCACGGCCGTCGGTCTTTCGAAAACCCCGTGCGCCCTTCGCCTGCAGCGGCTGATCAGCGACGGCTACATCGACGGCTTCCGCGCCATCCTCAATCCGAAGAAGCTGGGTATGGACCATGTCGCCTTCGCCGAGGTGAAATTGTCCGATACCAAGGAGAAGGCGCTGACCGCATTCAATACCGCCGTCCGGAAAATCAAGGAGGTCGAGGAGTGCCACATGATCGCCGGCCGGTTCGATTACCTGCTGAAGATCCGGACTTCCGACATCAGACGCTACAGGGAAGTCCTCGGGGAAAAGATATCGAGTCTTCCCAATGTGGCAAGCACCTCCACCTCCGTCGCGATGGAATCCGTCAAGGAAAGCGGCCGCTGA
PROTEIN sequence
Length: 158
MSKIKQENSEIDTIDRKILDLLVENARISITEISTAVGLSKTPCALRLQRLISDGYIDGFRAILNPKKLGMDHVAFAEVKLSDTKEKALTAFNTAVRKIKEVEECHMIAGRFDYLLKIRTSDIRRYREVLGEKISSLPNVASTSTSVAMESVKESGR*