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SCNpilot_expt_1000_bf_scaffold_3652_curated_22

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: comp(27848..28759)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LysR family n=1 Tax=Rhodobacter sp. SW2 RepID=C8S537_9RHOB similarity UNIREF
DB: UNIREF100
  • Identity: 70.5
  • Coverage: 298.0
  • Bit_score: 418
  • Evalue 5.90e-114
Transcriptional regulator, LysR family {ECO:0000313|EMBL:EEW23902.1}; TaxID=371731 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sp. SW2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.5
  • Coverage: 298.0
  • Bit_score: 418
  • Evalue 8.30e-114
oxyR; LysR family transcriptional regulator; K04761 LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator similarity KEGG
DB: KEGG
  • Identity: 68.2
  • Coverage: 292.0
  • Bit_score: 392
  • Evalue 1.10e-106
  • rbh

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Taxonomy

Rhodobacter sp. SW2 → Rhodobacter → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 912
ATGAGTTTGATTTCCATCCGGCATCTCCGTTATTTCGATGCGCTGTCCCAGCACGGGCATTTCGGCCGGGCCGCCGAAGCCTGCGCCATTTCCCAGCCGGCGCTCTCCCTGCAGGTCAAGGAGCTGGAAGAAGTGCTCGGCGTATCGTTGATCGAACGAGGCAGCCGGCAGATCCGGCTGACCAGCGTCGGGGAAGCCTTCGTGCCGCGTGTGCGCGAAATTTTACGCGCCATCGATGAATTGGGCGATCTGGCGCGCGCCTCGCTGAGCCCGCTGGCCGGCCGGCTGCGCATCGGCATGATCCCGACCGTCGCGCCCTATCTGCTGCCGGCGTTCATCAAGCGGCTGACCGAGGATTTCCCCGATCTCGACCCGCGTCCGCGCGAGGCGGTGACGCAGAAGCTGATCGAGGACCTCATGGACGGCCGCCTGGACGTTGCCGTCGTGGCGCTGCCGGTCTCCGAGCCGTCGCTGTACGAACAGCTGCTCTTCGATGAGGAATTCATGCTGGTAAGGCCCTTGAGCGACCACGACAAGCCGGTGCCGAATTCGGACGTGCTGCGCGAGATGCGCCTGCTGCTCTTGGAGGAGGGGCATTGCTTTCGCGAGCAGGCCCTGTCGTTCTGCAAGATGTCTCCCACCGTGGCGCGCGAGCTGATGGAGGGGAGCTCCTTGTCGACCCTGGTGCAGATGGTCGGGGTCGGCCTCGGCGTTACGCTCATCCCCAGCATGGCGCTGGCCACCGAGACCGCGTCCGCAAAGGTTTCCGTTGCCAGGCTGGATGCGCCGCGGCCGTCGCGCAGCATCGGCATGGTCTGGCGGAAAACCAATCCGCTGGCGGAGGGGTTTTCGCAGATTGCCGAAATCCTCCGCCAGGAGCATGAAAACCACAGGCTTTCCAGCGCCGTGTAA
PROTEIN sequence
Length: 304
MSLISIRHLRYFDALSQHGHFGRAAEACAISQPALSLQVKELEEVLGVSLIERGSRQIRLTSVGEAFVPRVREILRAIDELGDLARASLSPLAGRLRIGMIPTVAPYLLPAFIKRLTEDFPDLDPRPREAVTQKLIEDLMDGRLDVAVVALPVSEPSLYEQLLFDEEFMLVRPLSDHDKPVPNSDVLREMRLLLLEEGHCFREQALSFCKMSPTVARELMEGSSLSTLVQMVGVGLGVTLIPSMALATETASAKVSVARLDAPRPSRSIGMVWRKTNPLAEGFSQIAEILRQEHENHRLSSAV*