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SCNpilot_expt_1000_bf_scaffold_1572_curated_8

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: 8434..9519

Top 3 Functional Annotations

Value Algorithm Source
permease n=1 Tax=Rhizobium mongolense RepID=UPI0003B6B4AF similarity UNIREF
DB: UNIREF100
  • Identity: 72.4
  • Coverage: 362.0
  • Bit_score: 533
  • Evalue 1.50e-148
YjgP/YjgQ family permease protein {ECO:0000313|EMBL:AJD40705.1}; TaxID=1418105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium gallicum bv. gallicum R602.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.1
  • Coverage: 362.0
  • Bit_score: 533
  • Evalue 2.80e-148
permease; K11720 lipopolysaccharide export system permease protein similarity KEGG
DB: KEGG
  • Identity: 69.1
  • Coverage: 362.0
  • Bit_score: 511
  • Evalue 1.90e-142

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Taxonomy

Rhizobium gallicum → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1086
GTGATCCTCTCGACCCTCGGGCGCTATTTTCTGAAGCGCTATCTGCTGACCATGTTCTGGTTCCTGATCGGCGTCGCCTCGATCGTCTTCCTGATCGATTTCTCCGAGACGTCGGGGCGCATGTCTGGGCTGACCGGCTACAGCCTGTTCGGCGTCTTCCTGATGACGCTGCTGCGCCTGCCGCTCATCCTGCAGCAGACGATCCCGTTTATTGCACTGTTCGTCGGCATGACGGTGCTGATCAGCCTCAACCGCCGCTACGAACTGGTGGTGACGCGCGCCGCCGGCGCCTCCGTCTGGCAGTTCATGTCGCCCTTCGTGGTCGGGGCGCTGCTCACCGGCCTCGCCACCACCTTCGCGCTGAACCCGCTTGCGGCCTGGGGCCAGCGGAAAGCGCTGGCGGTCGAAGCGGAATGGCGCACGCGCTCCGGCTCGCCCGCCGCATCAGCCCTGCCCTGGATCCGCCAGATCAGCGACGGCGACGATACCGTGATCGGCGGACGGGTCATCCTGGAGGACGGAACGCTGCTGGTCGATGCCGTGGTTCTGCACTTCGGCGCCGATGGCCGGATCGTCTCGCGGCAGGACGCAAGCTCGGCAAAATTGCAAGATGGTTACTGGTTGCTTAAGGACGTGACGGAGACGCGGCCGGGCGAAATCTCAACCCGGCACAGCACTGCCCAGGTTCGAACCAATCTCAAGCCGGAATTCGTTCAGCAACGGATGACGCAGCCGGAAACCGTTGCTTTTTATGATCTTTCTAACAAAATTTCAGTTGCGCGCGCCTTCGGCGTTTCAACCAAGGCGCTCGAAACCCAGTTTCACTCGCTCTTGTCGATGCCGCTGCTTCTGGTGGCGATGACAATGATCGCTGCAACCGTTTCGCTCAAGTTCAGCCGTTTCGCACAATCGCGTTCGGTGATTCTGGGTGGAATCATTTCAGGCTTCGTGCTTTATGTTGTGACCGTGCTTGTGAAAGCTTTCGGAAGCAGCGGGGTGGTGCCTCCGTTCATCGCGGCCTGGATTCCGGTTGTCGTGGCGCTGGCACTCGGGGCAACGATTCTGCTGCATCAGGAGGATGGCTAG
PROTEIN sequence
Length: 362
VILSTLGRYFLKRYLLTMFWFLIGVASIVFLIDFSETSGRMSGLTGYSLFGVFLMTLLRLPLILQQTIPFIALFVGMTVLISLNRRYELVVTRAAGASVWQFMSPFVVGALLTGLATTFALNPLAAWGQRKALAVEAEWRTRSGSPAASALPWIRQISDGDDTVIGGRVILEDGTLLVDAVVLHFGADGRIVSRQDASSAKLQDGYWLLKDVTETRPGEISTRHSTAQVRTNLKPEFVQQRMTQPETVAFYDLSNKISVARAFGVSTKALETQFHSLLSMPLLLVAMTMIAATVSLKFSRFAQSRSVILGGIISGFVLYVVTVLVKAFGSSGVVPPFIAAWIPVVVALALGATILLHQEDG*