name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_1000_bf_scaffold_1572_curated_1
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3..1331
|
Putative drug resistance ATPase-1 (Drug RA1) family ABC transporter n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LKS2_RHITR
putative drug resistance ATPase-1 (Drug RA1) family ABC transporter
Glycosyl transferase family 1 {ECO:0000313|EMBL:KDP71037.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;"
|
|
SCNpilot_expt_1000_bf_scaffold_1572_curated_2
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1438..2283
|
Putative xylanase/chitin deacetylase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CWE8_9RHIZ
Putative xylanase/chitin deacetylase {ECO:0000313|EMBL:EYR78794.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
polysaccharide deacetylase
|
|
SCNpilot_expt_1000_bf_scaffold_1572_curated_3
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2675..3271
|
galactose 1-dehydrogenase; K00035 D-galactose 1-dehydrogenase [EC:1.1.1.48]
Galactose 1-dehydrogenase {ECO:0000313|EMBL:ACI54366.1}; EC=1.1.1.48 {ECO:0000313|EMBL:ACI54366.1};; TaxID=395492 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii (strain WSM2304).;"
Galactose 1-dehydrogenase n=1 Tax=Rhizobium leguminosarum bv. trifolii (strain WSM2304) RepID=B5ZWY9_RHILW
|
|
SCNpilot_expt_1000_bf_scaffold_1572_curated_4
Bradyrhizobium sp. LTSP849, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3358..5061
|
Uncharacterized protein n=1 Tax=Achromobacter piechaudii HLE RepID=J4YEY0_9BURK
Membrane protein {ECO:0000313|EMBL:KJC48274.1}; TaxID=1615890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP849.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_1572_curated_5
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5095..5544)
|
DNA polymerase III subunit chi; K02339 DNA polymerase III subunit chi [EC:2.7.7.7]
DNA polymerase III, chi subunit n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2012 RepID=J0VKD4_RHILT
DNA polymerase III, chi subunit {ECO:0000313|EMBL:EJC73243.1}; TaxID=754522 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM2012.;"
|
|
SCNpilot_expt_1000_bf_scaffold_1572_curated_6
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5547..7037)
|
Probable cytosol aminopeptidase n=1 Tax=Rhizobium etli CNPAF512 RepID=F2AJW7_RHIET
Probable cytosol aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; Leucine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; Leucyl aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; TaxID=993047 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli CNPAF512.;"
|
|
SCNpilot_expt_1000_bf_scaffold_1572_curated_7
Rhizobium mesoamericanum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7265..8437
|
Permease YjgP/YjgQ family protein n=1 Tax=Rhizobium mesoamericanum STM3625 RepID=K0PEM3_9RHIZ
Permease YjgP/YjgQ family protein {ECO:0000313|EMBL:CCM75016.1}; TaxID=1211777 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium mesoamericanum STM3625.;"
permease; K07091 lipopolysaccharide export system permease protein
|
|
SCNpilot_expt_1000_bf_scaffold_1572_curated_8
Rhizobium gallicum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
8434..9519
|
permease n=1 Tax=Rhizobium mongolense RepID=UPI0003B6B4AF
YjgP/YjgQ family permease protein {ECO:0000313|EMBL:AJD40705.1}; TaxID=1418105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium gallicum bv. gallicum R602.;"
permease; K11720 lipopolysaccharide export system permease protein
|
|
SCNpilot_expt_1000_bf_scaffold_1572_curated_9
Rhizobium gallicum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9519..11849
|
organic solvent tolerance n=1 Tax=Rhizobium mongolense RepID=UPI0003B56426
LPS-assembly protein LptD {ECO:0000256|HAMAP-Rule:MF_01411, ECO:0000256|SAAS:SAAS00019908}; Flags: Precursor;; TaxID=1418105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium gallicum bv. gallicum R602.;"
organic solvent tolerance protein OstA; K04744 LPS-assembly protein
|
|
SCNpilot_expt_1000_bf_scaffold_1572_curated_10
Rhizobium sp., Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12037..12972
|
Uncharacterized protein n=1 Tax=Rhizobium sp. RepID=L0NDH0_RHISP
Uncharacterized protein {ECO:0000313|EMBL:CCF18861.1}; TaxID=391 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp.;"
SurA domain-containing protein
|
|
SCNpilot_expt_1000_bf_scaffold_1572_curated_11
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12985..13995
|
4-hydroxythreonine-4-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00536, ECO:0000256|SAAS:SAAS00086154}; EC=1.1.1.262 {ECO:0000256|HAMAP-Rule:MF_00536, ECO:0000256|SAAS:SAAS00086154};; 4-(phosphohydroxy)-L-threonine dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00536}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase; K00097 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262]
4-hydroxythreonine-4-phosphate dehydrogenase n=1 Tax=Rhizobium freirei PRF 81 RepID=N6UVU4_9RHIZ
|
|
SCNpilot_expt_1000_bf_scaffold_1572_curated_12
Rhizobium grahamii, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13995..14822
|
Ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015019}; EC=2.1.1.182 {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015085};; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethyladenosine transferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethylase {ECO:0000256|HAMAP-Rule:MF_00607}; S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase {ECO:0000256|HAMAP-
Ribosomal RNA small subunit methyltransferase A n=1 Tax=Rhizobium grahamii CCGE 502 RepID=S3HM71_9RHIZ
ksgA; dimethyladenosine transferase
|
|
SCNpilot_expt_1000_bf_scaffold_1572_curated_13
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(14966..15634)
|
Guanylate kinase {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00021750}; EC=2.7.4.8 {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00036702};; GMP kinase {ECO:0000256|HAMAP-Rule:MF_00328}; TaxID=491916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli (strain CIAT 652).;"
Guanylate kinase n=2 Tax=Rhizobium etli RepID=B3PUU5_RHIE6
|
|
SCNpilot_expt_1000_bf_scaffold_1572_curated_14
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15638..16525)
|
TIGR00255 family protein n=1 Tax=Rhizobium sp. CF142 RepID=J1SS25_9RHIZ
YicC domain protein {ECO:0000313|EMBL:CDN47237.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizobium galegae.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_1572_curated_15
unknown
|
Not on your lists |
16977..17201
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_1572_curated_16
unknown
|
Not on your lists |
comp(17196..17825)
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_1572_curated_17
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(17990..19252)
|
fabF; 3-oxoacyl-ACP synthase; K09458 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
rbh
3-oxoacyl-(Acyl-carrier-protein) synthase II {ECO:0000313|EMBL:KJX88931.1}; EC=2.3.1.41 {ECO:0000313|EMBL:KJX88931.1};; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
3-oxoacyl-[acyl-carrier-protein] synthase 2 n=2 Tax=Agrobacterium RepID=Q7CZZ8_AGRT5
|
|
SCNpilot_expt_1000_bf_scaffold_1572_curated_18
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(19373..19609)
|
Acyl carrier protein n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2Q3R8_9RHIZ
Acyl carrier protein {ECO:0000256|HAMAP-Rule:MF_01217, ECO:0000256|RuleBase:RU003545}; Short=ACP {ECO:0000256|HAMAP-Rule:MF_01217};; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
acpP; acyl carrier protein; K02078 acyl carrier protein
|
|
SCNpilot_expt_1000_bf_scaffold_1572_curated_19
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(19897..20634)
|
fabG; 3-ketoacyl-ACP reductase; K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
3-ketoacyl-(Acyl-carrier-protein) reductase NodG n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2PBV2_9RHIZ
3-ketoacyl-(Acyl-carrier-protein) reductase NodG {ECO:0000313|EMBL:EKF58363.1}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium albertimagni AOL15.;"
|
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SCNpilot_expt_1000_bf_scaffold_1572_curated_20
Rhizobium sp. PDO1-076, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(20654..21646)
|
Malonyl CoA-acyl carrier protein transacylase {ECO:0000256|PIRNR:PIRNR000446}; EC=2.3.1.39 {ECO:0000256|PIRNR:PIRNR000446};; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. PDO1-076.;"
malonyl CoA-acyl carrier protein transacylase; K00645 [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
ACP S-malonyltransferase n=1 Tax=Rhizobium giardinii RepID=UPI00036DD063
|
|
SCNpilot_expt_1000_bf_scaffold_1572_curated_21
Rhizobium sp. Pop5, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
21771..22814
|
Aldo/keto reductase n=1 Tax=Rhizobium sp. Pop5 RepID=K0W0F4_9RHIZ
Aldo/keto reductase {ECO:0000313|EMBL:EJZ23075.1}; TaxID=1223565 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. Pop5.;"
oxidoreductase
|
|
SCNpilot_expt_1000_bf_scaffold_1572_curated_22
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
22832..23341
|
hypothetical protein n=1 Tax=Rhizobium radiobacter RepID=UPI00035C4335
Uncharacterized protein {ECO:0000313|EMBL:EPR19121.1}; TaxID=1336745 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium radiobacter DSM 30147.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_1572_curated_23
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
23592..24050
|
30S ribosomal protein S6 n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LHC6_RHITR
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;"
30S ribosomal protein S6
|
|
SCNpilot_expt_1000_bf_scaffold_1572_curated_24
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
24063..24311
|
30S ribosomal protein S18 n=3 Tax=Rhizobium fredii RepID=RS18_RHISN
rpsR; 30S ribosomal protein S18; K02963 small subunit ribosomal protein S18
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;"
|
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SCNpilot_expt_1000_bf_scaffold_1572_curated_25
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
24453..25427
|
membrane protein n=1 Tax=Rhizobium sp. JGI 0001005-K05 RepID=UPI0003798489
Putative transmembrane protein {ECO:0000313|EMBL:EGE55229.1}; TaxID=993047 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli CNPAF512.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_1572_curated_26
Rhizobium sp. H41, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
25452..26027
|
50S ribosomal protein L9 n=2 Tax=Rhizobium RepID=U4PS98_9RHIZ
50S ribosomal protein L9
50S ribosomal protein L9 {ECO:0000256|HAMAP-Rule:MF_00503}; TaxID=1510041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. H41.;"
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SCNpilot_expt_1000_bf_scaffold_1572_curated_27
Rhizobium sp. AP16, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(26098..27162)
|
Multidrug resistance efflux system protein n=2 Tax=Rhizobium/Agrobacterium group RepID=B9JCB5_AGRRK
multidrug resistance efflux system protein
Multidrug resistance efflux pump {ECO:0000313|EMBL:EJK85129.1}; Flags: Precursor;; TaxID=1144306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. AP16.;"
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SCNpilot_expt_1000_bf_scaffold_1572_curated_28
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(27171..28808)
|
Uncharacterized protein n=2 Tax=Rhizobium/Agrobacterium group RepID=B9JCB4_AGRRK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACM26035.1}; TaxID=311403 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium radiobacter (strain K84 / ATCC BAA-868).;"
|
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SCNpilot_expt_1000_bf_scaffold_1572_curated_29
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(28805..29260)
|
Transcriptional regulator, MarR family n=6 Tax=Rhizobium meliloti RepID=F6BQU4_SINMB
MarR family transcriptional regulator; K06075 MarR family transcriptional regulator, transcriptional regulator for hemolysin
Transcriptional regulator {ECO:0000313|EMBL:AEH79785.1}; TaxID=707241 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium meliloti (strain SM11).;"
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SCNpilot_expt_1000_bf_scaffold_1572_curated_30
Rhizobium sp. CF122, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(31044..31346)
|
Putative membrane protein n=1 Tax=Rhizobium sp. CF122 RepID=J2INI1_9RHIZ
Putative membrane protein {ECO:0000313|EMBL:EJL50268.1}; Flags: Precursor;; TaxID=1144312 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF122.;"
hypothetical protein
|