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SCNpilot_expt_1000_bf_scaffold_4786_curated_26

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: comp(23305..23934)

Top 3 Functional Annotations

Value Algorithm Source
Putative TetR family transcriptional regulator n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CLF0_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 90.0
  • Coverage: 209.0
  • Bit_score: 390
  • Evalue 1.20e-105
TetR family transcriptional regulator {ECO:0000313|EMBL:KDP72599.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.3
  • Coverage: 209.0
  • Bit_score: 396
  • Evalue 3.10e-107
putative TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 81.3
  • Coverage: 209.0
  • Bit_score: 362
  • Evalue 1.10e-97

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Taxonomy

Ensifer adhaerens → Ensifer → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 630
ATGGAACAGGCGATAAGCGACAGCGGCTGGCGCGGCTCCCAGGAGGGATGGCTGGAGGCTGCCTACGACTCGCTGCTCGAATCCGGCGTCGAATCGGTGAAGATCCTGCCGCTGGCCAAGCGGCTCAACCTCTCGCGCACCAGCTTCTACTGGTTCTTCAAGGACCGGGAAGAACTGCTGGGCGCACTTGTCGCCCGCTGGCGGGAAAAGAATACGGGCAACCTCGTGAAGCAGTCCGAGGCCTATGCGGAATCACTGGCCGAAGCGATGCTGAACGTCTTCGACTGCTGGGTGAACAAGGAGTTGTTCGACTCGCAGTTCGAGTTCGCCGTGCGCAGCTGGGCGTTGCAGTCGCCGGATATCCTGTCCGAGGTGCGGCAGGCAGACCAGGTGCGCATGGAGGCACTGGGCCGCATGTTCATGCGGTTCGGTTACGACGAAGGGCCGGCGGATGTCCGCGCCCGGACCACCTATCTGGTCCAGATCGGCTATATTTCGATGCAGTCCACGGAGGACCTCGCGCTACGCATGAAGCGCATCCCCGAATACATCTCGATTTATACCGGCCAGGTTCCGCAAAAGCGGGAACTCGACCGTTTCTTTGCGCGGCATGGATACAAACCGGAGTGA
PROTEIN sequence
Length: 210
MEQAISDSGWRGSQEGWLEAAYDSLLESGVESVKILPLAKRLNLSRTSFYWFFKDREELLGALVARWREKNTGNLVKQSEAYAESLAEAMLNVFDCWVNKELFDSQFEFAVRSWALQSPDILSEVRQADQVRMEALGRMFMRFGYDEGPADVRARTTYLVQIGYISMQSTEDLALRMKRIPEYISIYTGQVPQKRELDRFFARHGYKPE*