ggKbase home page

SCNpilot_expt_1000_bf_scaffold_3990_curated_2

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: 1479..2540

Top 3 Functional Annotations

Value Algorithm Source
Ribose transport system permease protein RbsC n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EVN4_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 89.0
  • Coverage: 355.0
  • Bit_score: 621
  • Evalue 4.10e-175
Ribose transport system permease protein RbsC {ECO:0000313|EMBL:EYR78671.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.0
  • Coverage: 355.0
  • Bit_score: 621
  • Evalue 5.80e-175
monosaccharide-transporting ATPase; K10440 ribose transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 81.4
  • Coverage: 355.0
  • Bit_score: 567
  • Evalue 3.80e-159

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1062
ATGACGACAGCCACCCAAACTGCCGCCGGATCGGCCAATAGCGGCTCATTGCTGCTGACGCTGATGAAGCTCCGCACCTTCATCGCCCTTTTCGCCGTCATCATCTTCTTCTCGATCTTCGCGCCGAACTTCCTGTCGACCGCGAACATGATCCTGATGTCGAAGCATGCGACGCAGAACGCCTTCCTGGCGATCGGCATGACCTTCGTCATCATCACCGGCGGCATCGATCTCTCGGTCGGCTCGATCGTCGGCCTGTGCGGCATGATCGCCGGCGGCCTGATCATCTACGGCATCGACCTGCCGATCGGCTATACGGTTTATTTCAACATTCTCGAAGTGGCCGTCATCGTCGCCGTCGTCGGCGTGTTGATCGGTGCCGTCAACGGCCTGCTGATCACGCGGCTGAACGTCGCGCCATTCATTGCCACGCTCGGCACGCTCTATGTCGCCCGCGGCGCGGCGCTGCTCTACTCCGATGGCCAGACGCTGCCGAACCTCGTCGGCCGAGAAGACCTCGGCAACCAGGGTTTTTCCTATTTCGGCTCCGGCACCATTATCGGCCTGCCGGTCTCGGTGTGGATGCTGGTCGTCGTCGCATTCGGCGCCGCCTACTTCGCCCGCTTCGTGCCGCTCGGCCGTCATATCTTTGCCGTCGGCGGCAATGAGCGCGCCGCCCGCATGTCCGGTATCCGCGTCAGCCGGGTGAAAATGTTCGTCTACATGTTCTCCGGCTTCTGCGCCGCGCTGGTGGGCCTGATCGTCTCTTCGGAACTGATGGCGTCGCATCCGGCGACCGGCACCAACCTCGAACTCAACGCCATCGCCGCAGCCGTTCTCGGCGGCACCTCGATGTCGGGCGGGCGCGGCACGATCGGCGGCACCATCGTCGGCGCCTTCGTCATCGGCATCCTCTCCGATGGCCTTGTCATGATGGGCGTATCATCCTTCTGGCAGATGGTCATCAAGGGTCTGGTCATCATCATCGCCGTCGTCGTCGACCAGGCGCAGCGCAAGATGCAGGCCCGCGTGACGCTGATGCAGATGGCAAAGCAGGGATAA
PROTEIN sequence
Length: 354
MTTATQTAAGSANSGSLLLTLMKLRTFIALFAVIIFFSIFAPNFLSTANMILMSKHATQNAFLAIGMTFVIITGGIDLSVGSIVGLCGMIAGGLIIYGIDLPIGYTVYFNILEVAVIVAVVGVLIGAVNGLLITRLNVAPFIATLGTLYVARGAALLYSDGQTLPNLVGREDLGNQGFSYFGSGTIIGLPVSVWMLVVVAFGAAYFARFVPLGRHIFAVGGNERAARMSGIRVSRVKMFVYMFSGFCAALVGLIVSSELMASHPATGTNLELNAIAAAVLGGTSMSGGRGTIGGTIVGAFVIGILSDGLVMMGVSSFWQMVIKGLVIIIAVVVDQAQRKMQARVTLMQMAKQG*