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SCNpilot_expt_1000_bf_scaffold_2394_curated_21

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: comp(20679..21401)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LuxR family n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LL58_RHITR similarity UNIREF
DB: UNIREF100
  • Identity: 55.4
  • Coverage: 240.0
  • Bit_score: 256
  • Evalue 3.10e-65
transcriptional regulator, LuxR family similarity KEGG
DB: KEGG
  • Identity: 55.4
  • Coverage: 240.0
  • Bit_score: 256
  • Evalue 9.70e-66
Transcriptional regulator, LuxR family {ECO:0000313|EMBL:AGB71977.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.4
  • Coverage: 240.0
  • Bit_score: 256
  • Evalue 4.30e-65

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Taxonomy

Rhizobium tropici → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 723
ATGATTTCCGTTGAACGACAGTTGCTGCTGAGCGCCGAACTTTCATCGGCCGAATCCCGCGTTGCCTTCATGAATGCCATGAGCCGCGTGCGCATGGCATTCGGTTTCTCCCATGCAACGGTCATGAAGATGCCGGTGCCAGCCGATATCCTGATCGCGCCGCTCATCCTCGAGACGACGCTGCCGCAGCAATTCGTGCAGGAATACGACCGGCATCATCTCTTGCGGGAATGCACTGCGGTCGCCAGGCTGAAGACTTCGCTGATGCCGCAATCGTGGTCGGTCACCGAGGCGCTCGAACGGACGAACCGCCAGCCCTCCGCCGCCATGCTCTCCCTTTCCAGCCGCTACGATCTGTCGATGGGCATATTGTTTTCCGTCATCGGCCTCGATGGCCAGCGGCTTGTCACACGCTACGACGGAACCCGTCTCCGGCCGAGCCAGTCCGAAATCAACGAACTCGGCATGTTGTCGGTACAGGCGGTCGAAAGCTATAACGAGCTTCGCCGTCGCGAGAATGCCAAGGGCCAGATCCTGTCGGAACGGGAACTCGAGGTCGTGCGCTGGACGGCCCAGGGCAAGACCTCGGTGGAAATCGGACAGATCCTTTCGCTTTCCGATCACACGGTCAACGCCTACCTCAACAACGCCATCAAAAAACTGGATTGTGTCAACAGAACGCAGCTGGTCGCAAAAGCCATAAGGCTGAAGCTCATAACATAA
PROTEIN sequence
Length: 241
MISVERQLLLSAELSSAESRVAFMNAMSRVRMAFGFSHATVMKMPVPADILIAPLILETTLPQQFVQEYDRHHLLRECTAVARLKTSLMPQSWSVTEALERTNRQPSAAMLSLSSRYDLSMGILFSVIGLDGQRLVTRYDGTRLRPSQSEINELGMLSVQAVESYNELRRRENAKGQILSERELEVVRWTAQGKTSVEIGQILSLSDHTVNAYLNNAIKKLDCVNRTQLVAKAIRLKLIT*