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SCNpilot_expt_1000_bf_scaffold_887_curated_16

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: comp(15575..17089)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Rhizobium giardinii RepID=UPI00037BCBE2 similarity UNIREF
DB: UNIREF100
  • Identity: 54.3
  • Coverage: 510.0
  • Bit_score: 545
  • Evalue 5.30e-152
Peptidase C14, caspase catalytic subunit p20 {ECO:0000313|EMBL:EYR80010.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 51.2
  • Coverage: 516.0
  • Bit_score: 514
  • Evalue 2.40e-142
peptidase S1/S6 family chymotrypsin-type protein similarity KEGG
DB: KEGG
  • Identity: 31.2
  • Coverage: 504.0
  • Bit_score: 186
  • Evalue 2.60e-44

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1515
ATGCCCAGATTTCCATTCCGTTTCGCGCTCGTCCTCACCGCGCTGCTGATGGCTTCTTTCGCCGCACGCGCGGAAGACAGGGCCTTGCTGATCGGCATCGGCGAATATGAAAAGCTGCCGGAACGCATGTTCCTGCATGGTCCGGTCAACGACGTGGCATCGATGAAGACGCTTCTCACAGGCACGCTCGGCTTCAAGCCGGAAGCCATCAAGGTCCTGCTGGACAAGGAGGCGACCCGCAGCGCGATGCTGGCCACGGCCGAAGAATGGCTCGTCGCCGGGACAAAGCCGGGCGACCGCGTCTACTTCTATTATTCCGGCCACGGCCTTCAGGTGAAGGACGACAATGGCGACGAGGAGGACGGGCTCGACGAGGCGATTGCCACCTACGACATTACCCCCGGTGAAAGCGACTGGACCAACATCATTCGCGACGACGACATCCAGGCGCTCACCGAGAAGATGAAGGATCGCATGGTGACACTCATCATCGATGCCTGCCACTCCGGCACGCTGTCGCGATCGCTGGAGGGCTCGCTCGATGATTATGTTGCCGGCATGCGATACCTGCCGCGGCCTTCGAAGGACAACAGCCAACCGACGACGCGCGGCCTGAAGATCGAGCTTGCCGTCGATACCAAGCCGGAGGCGGTGATCGAGGGATCGCTCACCACCTGGAGTGCTGCCGCGCCCTACCAGGTTGCCTGGGACGACGACCGGCTGCCGCCGGACGAGAGGCACGGCGTCTTCACCGCCGCCTTCGTCGCGGGGCTGGTGAAGGGGGAGGCCGATGCCAACGGCAACGGCGTCACCAGTGTTTCGGAACTCTTCCAGTACCTGAAACTGAAATCCGGCGAATACTGCAAGCTGAAGAAGGACTGCCAGTCGCTCGACCCGCAGATCGAAGCCTCGCCGCAATTGCTGGGGGCGGAGCTTGCCGGTTACACCAAGCCGGCCGTGGAGGAAAAACCGCAACTCCAGAAGGTTGAAACGCTGCAGACGCCGCAGCCGGTCTATGTCGCCGCCGATCCCGTCCAGTCGGTCGGCGATATCCTGGGTGGATATGACAACGGCTCGGTGGCGGTTTCCATAGACCGGGGGACGACGCTGCATGCCGGCGACGTCTTCAAGATCGCGATAAAAAGCGTGTCCGGCGGGCAACTCGTGCTTCTCGACGTCAACGCCAAGGGCGAGGCGACGCAGATTTTCCCCAATACCGTCGCGCAAAAAATCACGCCGCTGTCGCCGAACCAGACATTAACCATTCCGGACGAATATTACGGCTTCGATTTCGAGGCCGGCGAAAGCGGCGACAGCGTCCTCGTGGCTTTGGTCATCAACGACGACATCGATCTTTCGCAACTGGTGCCGGCCGACCAGGGCCTCGAAGCGACCTTGAACGCGCGGGCGGCGCTGAGCGAGATCGTCTCCCGCCTCAGCAAACCGGTCGCCACCGCCGACGGTTTCCGGGCGGTCCGCTGGACCGCCGGCAAATACGACTATTCGATCAAGTGA
PROTEIN sequence
Length: 505
MPRFPFRFALVLTALLMASFAARAEDRALLIGIGEYEKLPERMFLHGPVNDVASMKTLLTGTLGFKPEAIKVLLDKEATRSAMLATAEEWLVAGTKPGDRVYFYYSGHGLQVKDDNGDEEDGLDEAIATYDITPGESDWTNIIRDDDIQALTEKMKDRMVTLIIDACHSGTLSRSLEGSLDDYVAGMRYLPRPSKDNSQPTTRGLKIELAVDTKPEAVIEGSLTTWSAAAPYQVAWDDDRLPPDERHGVFTAAFVAGLVKGEADANGNGVTSVSELFQYLKLKSGEYCKLKKDCQSLDPQIEASPQLLGAELAGYTKPAVEEKPQLQKVETLQTPQPVYVAADPVQSVGDILGGYDNGSVAVSIDRGTTLHAGDVFKIAIKSVSGGQLVLLDVNAKGEATQIFPNTVAQKITPLSPNQTLTIPDEYYGFDFEAGESGDSVLVALVINDDIDLSQLVPADQGLEATLNARAALSEIVSRLSKPVATADGFRAVRWTAGKYDYSIK*