ggKbase home page

SCNpilot_expt_1000_bf_scaffold_1479_curated_18

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: comp(17537..17932)

Top 3 Functional Annotations

Value Algorithm Source
Putative AgaE n=1 Tax=Agrobacterium tumefaciens CCNWGS0286 RepID=G6Y0Y2_RHIRD similarity UNIREF
DB: UNIREF100
  • Identity: 47.4
  • Coverage: 133.0
  • Bit_score: 117
  • Evalue 9.40e-24
D-amino acid oxidase {ECO:0000313|EMBL:KGM31364.1}; Flags: Fragment;; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.5
  • Coverage: 132.0
  • Bit_score: 119
  • Evalue 3.50e-24
AgaE protein similarity KEGG
DB: KEGG
  • Identity: 47.4
  • Coverage: 133.0
  • Bit_score: 117
  • Evalue 3.00e-24

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Inquilinus limosus → Inquilinus → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 396
TTGCATCCAACCGGCCATTCGCTCAACGAATGGCGCAATATTTTCAAGAGGCATCCGGAATTCAGATTGCTCGATCCGGTACCGGATGCGCCGCTGACAAATCATGTGCTCGAGGCGCTGGCGCAGGATTTCCCGGCATTCCGGAACACTGTTGTGGAGGAGCGCTGGGCTGGTAGCATTGACGTGACGCCGGACGCCATTCCGGTGGTCTCGAAGCTCGCCGTGGCCGGCGCCCACCTCATCACCGGCTTCTCCGGCCACGGTTTCGGAATGGGACCGGGCGCGGGCAAGTTGATGGCCGCTCTGGTCCGCAACGACACGCCGCCGGTCGACCCGGCGCCGATGGACATCGTGAGACTCGCTGATCGCAGCAAATTGCGCGTTGGGCCTCTGTGA
PROTEIN sequence
Length: 132
LHPTGHSLNEWRNIFKRHPEFRLLDPVPDAPLTNHVLEALAQDFPAFRNTVVEERWAGSIDVTPDAIPVVSKLAVAGAHLITGFSGHGFGMGPGAGKLMAALVRNDTPPVDPAPMDIVRLADRSKLRVGPL*