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SCNpilot_expt_1000_bf_scaffold_1479_curated_21

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: 21941..22210

Top 3 Functional Annotations

Value Algorithm Source
UPI0003CE5611 related cluster n=1 Tax=unknown RepID=UPI0003CE5611 similarity UNIREF
DB: UNIREF100
  • Identity: 60.9
  • Coverage: 69.0
  • Bit_score: 95
  • Evalue 2.60e-17
Peptide ABC transporter substrate-binding protein {ECO:0000313|EMBL:ESY89487.1}; TaxID=1287240 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC229A00.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.9
  • Coverage: 69.0
  • Bit_score: 95
  • Evalue 3.70e-17
extracellular solute-binding protein; K02035 peptide/nickel transport system substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 52.8
  • Coverage: 72.0
  • Bit_score: 88
  • Evalue 1.30e-15

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Taxonomy

Mesorhizobium sp. LNHC229A00 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 270
ATGAAGGACATTCAGGAGTCGTTCCACTATCATATGGGCGACAAGTCGACATCCGGCGCAAAATCGCTGCTGTCGCAGGTGGAATCGATCGACGCCGATGGCCCGAACACCATCATCTTCAACCTCAAATCCGGCACGGCCGACTTCCCCTACCTGGTTGCCGACTATCATCTGTCGATCATGCCGGCGAAGGAAGAAGGCGGAATCGACTGGCAGCGNNNNNNNNNNNNATTCTCGAGAATTTCGAGCCCGGCTCGTCGGTCAAGATGA
PROTEIN sequence
Length: 90
MKDIQESFHYHMGDKSTSGAKSLLSQVESIDADGPNTIIFNLKSGTADFPYLVADYHLSIMPAKEEGGIDWQXXXXXFSRISSPARRSR*