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SCNpilot_expt_1000_bf_scaffold_1392_curated_20

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: comp(22881..23636)

Top 3 Functional Annotations

Value Algorithm Source
Two-component response regulator protein n=3 Tax=Rhizobium/Agrobacterium group RepID=B9JBL7_AGRRK similarity UNIREF
DB: UNIREF100
  • Identity: 90.5
  • Coverage: 242.0
  • Bit_score: 438
  • Evalue 4.60e-120
ragA; two-component response regulator protein; K02483 two-component system, OmpR family, response regulator similarity KEGG
DB: KEGG
  • Identity: 90.5
  • Coverage: 242.0
  • Bit_score: 438
  • Evalue 1.40e-120
PhoB family transcriptional regulator {ECO:0000313|EMBL:KEA07572.1}; TaxID=359 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium rhizogenes.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.5
  • Coverage: 242.0
  • Bit_score: 438
  • Evalue 6.40e-120

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Taxonomy

Agrobacterium rhizogenes → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 756
ATGAACCATGTTGATCAAACTGCCGGCGGCGCGGATTCCGGTTGTTCGCCGAGCATGCGGGACGGTATGGTCGCCTCCATGAAGATTCTGCTGATCGAAGACGACCTGGAGGCCGCGGCCTACCTGACCAAAGCCTTCCGCGAGGCGGGCATCGTCGTCGATCATGCCAGCGACGGCGAGAGCGGCCTCTTCATGGGCACCGAAAACAGCTACGACGTGATGATCATCGACCGCATGCTGCCGCGCCGCGACGGTTTGTCTGTCATCAGCGAATTGCGGCGCAAGGGCGTGCATACGCCCGTGCTGATCCTTTCGGCGCTGGGGCAGGTGGACGACCGGGTGACGGGTCTGCGTGCCGGCGGCGACGATTATCTGCCGAAACCTTATGCCTTCAGCGAGCTTCTGGCCCGCGTCGAGGTGCTGGGGCGGCGCAAGGGCACGCCGGAGCAGGACATGGTCTACCGGGTCGCGAACCTGGAACTCGACCGCCTGTCGCATGAGGTGCGGCGCGGCGGCAAGGAGATCCTGCTGCAGCCGCGGGAATTCCGCCTGCTCGAATATCTCATGCGCAATGCTGGCCAGGTGGTGACCCGGACGATGCTTTTGGAAAACGTCTGGGACTATCATTTCGATCCGCAGACGAATGTGATCGACGTGCATGTCTCGCGGTTGCGGTCGAAGATCGAGAAGGATTTCGACCAGCCGTTGCTCAAGACCGTTCGCGGCGCCGGCTACATGATCAAAGATGAGGGCTAA
PROTEIN sequence
Length: 252
MNHVDQTAGGADSGCSPSMRDGMVASMKILLIEDDLEAAAYLTKAFREAGIVVDHASDGESGLFMGTENSYDVMIIDRMLPRRDGLSVISELRRKGVHTPVLILSALGQVDDRVTGLRAGGDDYLPKPYAFSELLARVEVLGRRKGTPEQDMVYRVANLELDRLSHEVRRGGKEILLQPREFRLLEYLMRNAGQVVTRTMLLENVWDYHFDPQTNVIDVHVSRLRSKIEKDFDQPLLKTVRGAGYMIKDEG*